RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 PNMA2Q9UL42 364 aa13.77□□□□□ -0.2
PRDM16-205ENST00000509860 MYH9P35579 1960 aaKnown RBP13.77□□□□□ -0.2
PRDM16-205ENST00000509860 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.21
PRDM16-205ENST00000509860 HIP1RO75146 1068 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 EDNRBP24530 442 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 CASP4P49662 377 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 ZNF720Q7Z2F6 126 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 SPATC1LQ9H0A9 340 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 ZHX3Q9H4I2 956 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
PRDM16-205ENST00000509860 TBC1D22BQ9NU19 505 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 ADGRG1Q9Y653 693 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 AKAP3O75969 853 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 KRT18P05783 430 aaKnown RBP13.77□□□□□ -0.21
PRDM16-205ENST00000509860 TERF1P54274 439 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 FKBP3Q00688 224 aaKnown RBP13.77□□□□□ -0.21
PRDM16-205ENST00000509860 MEA1Q16626 185 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 MAN2A1Q16706 1144 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 EDRF1Q3B7T1 1238 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 NSUN6Q8TEA1 469 aaKnown RBP13.77□□□□□ -0.21
PRDM16-205ENST00000509860 MOV10L1Q9BXT6 1211 aaKnown RBP13.77□□□□□ -0.21
PRDM16-205ENST00000509860 AGTPBP1Q9UPW5 1226 aa13.77□□□□□ -0.21
PRDM16-205ENST00000509860 ZC3H4Q9UPT8 1303 aaKnown RBP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 SORBS3O60504 671 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 MTIF2P46199 727 aaKnown RBP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 HERVK_113P62684 666 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 XRRA1Q6P2D8 792 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 MYRIPQ8NFW9 859 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 ATP4AP20648 1035 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 YWHABP31946 246 aaKnown RBP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 GTF2F1P35269 517 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 QARSP47897 775 aaKnown RBP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 ACRBPQ8NEB7 543 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 BAP1Q92560 729 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 CEP63Q96MT8 703 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 MAGEC2Q9UBF1 373 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 PFASO15067 1338 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 ALDH5A1P51649 535 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 CNGA4Q8IV77 575 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 ZSWIM4Q9H7M6 989 aa13.76□□□□□ -0.21
PRDM16-205ENST00000509860 CTDP1Q9Y5B0 961 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-205ENST00000509860 TISP43B9A030 160 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 CXCL11O14625 94 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 KRT9P35527 623 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 NPEPPSP55786 919 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 TBC1D8BQ0IIM8 1120 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 EAPPQ56P03 285 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-205ENST00000509860 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 CCDC60Q8IWA6 550 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-205ENST00000509860 C4orf19Q8IY42 314 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 LRRN4CLQ8ND94 238 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 SMCR8Q8TEV9 937 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-205ENST00000509860 IRX2Q9BZI1 471 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-205ENST00000509860 KCND2Q9NZV8 630 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 NFASCO94856 1347 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 EIF3DO15371 548 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRDM16-205ENST00000509860 GCNT3O95395 438 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 ARHGAP25P42331 645 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 TNNT3P45378 269 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-205ENST00000509860 FIGNQ5HY92 759 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 ABHD15Q6UXT9 468 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 FAM133AQ8N9E0 248 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 ZSWIM2Q8NEG5 633 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 PARVGQ9HBI0 331 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 PDLIM7Q9NR12 457 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 ODF2LQ9ULJ1 636 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 DNAH12Q6ZR08 3092 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 SOX10P56693 466 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 TRIM14Q14142 442 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 TFR2Q9UP52 801 aa13.75□□□□□ -0.21
PRDM16-205ENST00000509860 A0A1W2PQJ5 194 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 PDXKO00764 312 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 NR2F2P24468 414 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 PTPN14Q15678 1187 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 MAP1SQ66K74 1059 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-205ENST00000509860 ZNF746Q6NUN9 644 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-205ENST00000509860 MYCT1Q8N699 235 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 BSNDQ8WZ55 320 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 WDR24Q96S15 920 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 SYNGAP1Q96PV0 1343 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 IGSF9BQ9UPX0 1349 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 PLEKP08567 350 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-205ENST00000509860 GAP43P17677 238 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 ADAM9Q13443 819 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
PRDM16-205ENST00000509860 NAA15Q9BXJ9 866 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms