RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 ZSCAN18Q8TBC5 510 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P2-205ENST00000509855 CALML6Q8TD86 181 aa8.26□□□□□ -1.09
COL6A4P2-205ENST00000509855 SLC5A5Q92911 643 aa8.26□□□□□ -1.09
COL6A4P2-205ENST00000509855 MAML3Q96JK9 1138 aa8.26□□□□□ -1.09
COL6A4P2-205ENST00000509855 TACO1Q9BSH4 297 aaKnown RBP8.26□□□□□ -1.09
COL6A4P2-205ENST00000509855 USP36Q9P275 1121 aaKnown RBP8.26□□□□□ -1.09
COL6A4P2-205ENST00000509855 ULK1O75385 1050 aa8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 FBXO21O94952 628 aa8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 LSP1P33241 339 aa8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 SARSP49591 514 aaKnown RBP8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 IL13RA1P78552 427 aa8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 KANK2Q63ZY3 851 aa8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 DPP8Q6V1X1 898 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 DDX42Q86XP3 938 aaKnown RBP eCLIP8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 ERCC4Q92889 916 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 GPATCH3Q96I76 525 aa8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 OR10A5Q9H207 317 aa8.25□□□□□ -1.09
COL6A4P2-205ENST00000509855 UBA6A0AVT1 1052 aaPredicted RBP8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 IL13P35225 146 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 DDB1Q16531 1140 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 KRTAP19-4Q3LI73 84 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 TTC38Q5R3I4 469 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 FAM26FQ5R3K3 315 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 BROXQ5VW32 411 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 RNF219Q5W0B1 726 aaPredicted RBP8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 LRSAM1Q6UWE0 723 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 LHFPL2Q6ZUX7 228 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 PHYKPLQ8IUZ5 450 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 ADGRG2Q8IZP9 1017 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 WDR66Q8TBY9 1149 aa8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 RTF1Q92541 710 aaKnown RBP8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 YTHDC1Q96MU7 727 aaKnown RBP8.24□□□□□ -1.09
COL6A4P2-205ENST00000509855 A0A1B0GTL3 188 aa8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 KLHL18O94889 574 aa8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 NCLP19338 710 aaKnown RBP8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 SESN3P58005 492 aa8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 ROM1Q03395 351 aa8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 TRMT10BQ6PF06 316 aaKnown RBP8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 SPATS2Q86XZ4 545 aaKnown RBP8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
COL6A4P2-205ENST00000509855 PHLDB1Q86UU1 1377 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 H0Y858 1186 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 DDX3XO00571 662 aaKnown RBP eCLIP8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 APEX1P27695 318 aaKnown RBP8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 SLURP1P55000 103 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 SLC6A3Q01959 620 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 VMACQ2NL98 169 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 SLFN12LQ6IEE8 588 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 KANSL1Q7Z3B3 1105 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 RASSF3Q86WH2 238 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 SIAH1Q8IUQ4 282 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 C7orf31Q8N865 590 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 ADAMTS17Q8TE56 1095 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 KRTAP4-12Q9BQ66 201 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 L2HGDHQ9H9P8 463 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 LUC7LQ9NQ29 371 aaKnown RBP8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 FBXO10Q9UK96 956 aa8.22□□□□□ -1.09
COL6A4P2-205ENST00000509855 C9orf118A6NHY6 69 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 CDK11BP21127 795 aaKnown RBP8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 MYBPC3Q14896 1274 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 LCE3BQ5TA77 95 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 NECAB2Q7Z6G3 386 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 ZNF761Q86XN6 746 aaPredicted RBP8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 CLRN3Q8NCR9 226 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 ZNF496Q96IT1 587 aaPredicted RBP8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 ZDHHC5Q9C0B5 715 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 FTSJ1Q9UET6 329 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 MSRAQ9UJ68 235 aa8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 NOP58Q9Y2X3 529 aaKnown RBP8.21□□□□□ -1.1
COL6A4P2-205ENST00000509855 RGS3P49796 1198 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 CDKN1CP49918 316 aaPredicted RBP8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 TMPRSS15P98073 1019 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 FAPQ12884 760 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 MOGSQ13724 837 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 FRMD7Q6ZUT3 714 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 TXNDC5Q8NBS9 432 aaKnown RBP8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 TUBGCP5Q96RT8 1024 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 MS4A5Q9H3V2 200 aa8.2□□□□□ -1.1
COL6A4P2-205ENST00000509855 K7ESF4 209 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 CUTAO60888 179 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 ZSCAN22P10073 491 aaPredicted RBP8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 IBSPP21815 317 aaPredicted RBP8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 POLD1P28340 1107 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 JAG1P78504 1218 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 CD83Q01151 205 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 TOP3AQ13472 1001 aaPredicted RBP8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 WDR72Q3MJ13 1102 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 TMEM200BQ69YZ2 307 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 TIGD7Q6NT04 549 aaPredicted RBP8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 REXO1L1PQ8IX06 675 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 SP8Q8IXZ3 490 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 PRPF38AQ8NAV1 312 aaKnown RBP8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
COL6A4P2-205ENST00000509855 KATNBL1Q9H079 304 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms