RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	CYFIP1	Q7L576	1253 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	ZSCAN30	Q86W11	494 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	KSR1	Q8IVT5	923 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	C4orf19	Q8IY42	314 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	MYOCD	Q8IZQ8	938 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	MORC4	Q8TE76	937 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	VPS16	Q9H269	839 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	KCTD10	Q9H3F6	313 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	THAP9	Q9H5L6	903 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	PDGFC	Q9NRA1	345 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	SLC9A2	Q9UBY0	812 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	DBR1	Q9UK59	544 aa	Known RBP	11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	SAMM50	Q9Y512	469 aa		11.21	□□□□□ -0.61
FBXO38-215	ENST00000509411	ARHGEF35	A5YM69	484 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	CBFA2T2	O43439	604 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	HIP1R	O75146	1068 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	TRPA1	O75762	1119 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	FARP2	O94887	1054 aa	Predicted RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	ATG7	O95352	703 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	SUPT20HL2	P0C7V6	817 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	NMT1	P30419	496 aa	Known RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	YWHAB	P31946	246 aa	Known RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	SFN	P31947	248 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	RGS19	P49795	217 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZNF131	P52739	623 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	PSMC5	P62195	406 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	CCZ1B	P86790	482 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	CCZ1	P86791	482 aa	Predicted RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	STIM1	Q13586	685 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	KCTD2	Q14681	263 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	LY6K	Q17RY6	165 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	GNPTAB	Q3T906	1256 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	UTP14C	Q5TAP6	766 aa	Known RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	CEP135	Q66GS9	1140 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	SWSAP1	Q6NVH7	229 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	ANO5	Q75V66	913 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	MAEA	Q7L5Y9	396 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	FBXO16	Q8IX29	292 aa	Predicted RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	CSGALNACT2	Q8N6G5	542 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	RDM1	Q8NG50	284 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	COPS5	Q92905	334 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	JPH1	Q9HDC5	661 aa	Predicted RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	GPRC5C	Q9NQ84	441 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	RNF186	Q9NXI6	227 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	CPA4	Q9UI42	421 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	DDX41	Q9UJV9	622 aa	Known RBP	11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	PCDHA10	Q9Y5I2	948 aa		11.2	□□□□□ -0.62
FBXO38-215	ENST00000509411	PLXNA1	Q9UIW2	1896 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZMYM2	Q9UBW7	1377 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	ARID2	Q68CP9	1835 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	IGSF9B	Q9UPX0	1349 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	ECM2	O94769	699 aa	Predicted RBP	11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	FAM13A	O94988	1023 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	GUCY2C	P25092	1073 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	PPP1R2	P41236	205 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	GCLC	P48506	637 aa	Predicted RBP	11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	BMT2	Q1RMZ1	405 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	LHX8	Q68G74	356 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	MAMDC4	Q6UXC1	1216 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	ZNF507	Q8TCN5	953 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	CDHR1	Q96JP9	859 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	CNOT6L	Q96LI5	555 aa	Known RBP	11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	KATNBL1	Q9H079	304 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	LOXHD1	Q8IVV2	1947 aa		11.19	□□□□□ -0.62
FBXO38-215	ENST00000509411	IGKV6D-21	A0A0A0MT36	114 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	BICDL2	A1A5D9	508 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	GOLGA6L6	A8MZA4	724 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	RNF225	M0QZC1	329 aa	Predicted RBP	11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	USO1	O60763	962 aa	Known RBP	11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	PPP1R37	O75864	691 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	PSAP	P07602	524 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	ADORA2A	P29274	412 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	SOX10	P56693	466 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	MLLT1	Q03111	559 aa	Predicted RBP	11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	XKR9	Q5GH70	373 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	MIIP	Q5JXC2	388 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	CCDC62	Q6P9F0	684 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	GPR142	Q7Z601	462 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	CREBRF	Q8IUR6	639 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	LRRC8A	Q8IWT6	810 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	MYCT1	Q8N699	235 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	NPLOC4	Q8TAT6	608 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	NOC3L	Q8WTT2	800 aa	Known RBP	11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	BSND	Q8WZ55	320 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	CEP89	Q96ST8	783 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	PARK7	Q99497	189 aa	Known RBP	11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	STRA6	Q9BX79	667 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	GTPBP4	Q9BZE4	634 aa	Known RBP	11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	ANKEF1	Q9NU02	776 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	IMPACT	Q9P2X3	320 aa		11.18	□□□□□ -0.62
FBXO38-215	ENST00000509411	TGFB1I1	O43294	461 aa		11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	TBCA	O75347	108 aa	Known RBP	11.17	□□□□□ -0.62
FBXO38-215	ENST00000509411	GCNT3	O95395	438 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms