RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ENPP3O14638 875 aa18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 MAGEB2O15479 319 aa18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 C22orf31O95567 290 aa18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 TMEM62Q0P6H9 643 aa18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 TARBP2Q15633 366 aaKnown RBP18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 FAM167AQ96KS9 214 aa18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 CEP89Q96ST8 783 aa18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 FOXP1Q9H334 677 aaPredicted RBP18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
PDLIM5-212ENST00000509333 MARCH6O60337 910 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 GJB5O95377 273 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 BAG4O95429 457 aaKnown RBP18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 OATP04181 439 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 GHRP10912 638 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 MCM2P49736 904 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 EPHA7Q15375 998 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 XKR3Q5GH77 459 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 RTN4RL1Q86UN2 441 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 FAM184AQ8NB25 1140 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 APBB2Q92870 758 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 TOP1MTQ969P6 601 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 MTMR9Q96QG7 549 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 CEP131Q9UPN4 1083 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 TRPV2Q9Y5S1 764 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 KDM3AQ9Y4C1 1321 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 CHD9Q3L8U1 2897 aa18.16■□□□□ 0.5
PDLIM5-212ENST00000509333 EVPLQ92817 2033 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 PSMC5P62195 406 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 PRKCEQ02156 737 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 SPIRE1Q08AE8 756 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 EFCAB12Q6NXP0 572 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 SLFN12Q8IYM2 578 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 LINC01465Q8N7H1 131 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 MYLIPQ8WY64 445 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 RAD9AQ99638 391 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 PCDHA12Q9UN75 941 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 TANC1Q9C0D5 1861 aa18.15■□□□□ 0.5
PDLIM5-212ENST00000509333 DDX11L8A8MPP1 907 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 TLL1O43897 1013 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 SLITRK3O94933 977 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 P4HBP07237 508 aaKnown RBP18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 CA3P07451 260 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 TAP1Q03518 808 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 BANK1Q8NDB2 785 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 ZBED2Q9BTP6 218 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
PDLIM5-212ENST00000509333 TMEM150BA6NC51 233 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 GPR32O75388 356 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 AMHP03971 560 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 U2AF2P26368 475 aaKnown RBP eCLIP18.13■□□□□ 0.493e-9■■■■■ 33.8
PDLIM5-212ENST00000509333 CD52P31358 61 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 TSHZ1Q6ZSZ6 1077 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 ANO5Q75V66 913 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 PRDM12Q9H4Q4 367 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 RGL1Q9NZL6 768 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 WDR81Q562E7 1941 aa18.13■□□□□ 0.49
PDLIM5-212ENST00000509333 IGKV6-21A0A0C4DH24 114 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 LCHNA4D1U4 455 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 M0QZ92 97 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 TXKP42681 527 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 CRYBB1P53674 252 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 HTRA4P83105 476 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 ADGRE1Q14246 886 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 ZNF174Q15697 407 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 CALCRLQ16602 461 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 PPP2R2DQ66LE6 453 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 FAM117BQ6P1L5 589 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 C4orf19Q8IY42 314 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 MYOCDQ8IZQ8 938 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 SH2D3AQ9BRG2 576 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 TTC12Q9H892 705 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 SUGCTQ9HAC7 445 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 WRAP73Q9P2S5 460 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 NOC2LQ9Y3T9 749 aaKnown RBP18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 INSL6Q9Y581 213 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 COL6A3P12111 3177 aa18.12■□□□□ 0.49
PDLIM5-212ENST00000509333 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 VTNP04004 478 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 TMOD1P28289 359 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 CLCN3P51790 818 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 NOSTRINQ8IVI9 506 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 LRRC71Q8N4P6 559 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 C4orf32Q8N8J7 132 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
PDLIM5-212ENST00000509333 ZBTB39O15060 712 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 NEMFO60524 1076 aa18.1■□□□□ 0.49
PDLIM5-212ENST00000509333 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms