RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CYP39A1Q9NYL5 469 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
PHF3-209ENST00000509330 ZMYM2Q9UBW7 1377 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 CENPFP49454 3210 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 SLC26A4O43511 780 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
PHF3-209ENST00000509330 MAP3K9P80192 1104 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 RAPGEF1Q13905 1077 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 ANKRD35Q8N283 1001 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 PDCL2Q8N4E4 241 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 ERO1AQ96HE7 468 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 TYW1Q9NV66 732 aaKnown RBP16.37■□□□□ 0.21
PHF3-209ENST00000509330 ZNF263O14978 683 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 RGS20O76081 388 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 BCRP11274 1271 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 RARRES1P49788 294 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 XKR9Q5GH70 373 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 RETREG2Q8NC44 543 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 DRC1Q96MC2 740 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 FIZ1Q96SL8 496 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 TRAF3IP3Q9Y228 551 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
PHF3-209ENST00000509330 PPP1R12BO60237 982 aaPredicted RBP16.36■□□□□ 0.21
PHF3-209ENST00000509330 NOL4O94818 638 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 IPO7O95373 1038 aaKnown RBP16.36■□□□□ 0.21
PHF3-209ENST00000509330 PNMA6AP0CW24 399 aaPredicted RBP16.36■□□□□ 0.21
PHF3-209ENST00000509330 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
PHF3-209ENST00000509330 CCND2P30279 289 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 CYLC1P35663 651 aaPredicted RBP16.36■□□□□ 0.21
PHF3-209ENST00000509330 MAPK7Q13164 816 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 MEA1Q16626 185 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 EDRF1Q3B7T1 1238 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 FAM102BQ5T8I3 360 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 GJB7Q6PEY0 223 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 ZNF720Q7Z2F6 126 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 DNAAF5Q86Y56 855 aa16.36■□□□□ 0.21
PHF3-209ENST00000509330 PDXKO00764 312 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 AKR1B10O60218 316 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 TRIM49P0CI25 452 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 TRIM49CP0CI26 452 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 GFPT1Q06210 699 aaPredicted RBP16.35■□□□□ 0.21
PHF3-209ENST00000509330 VSIG10LQ86VR7 867 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 BAP1Q92560 729 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 ZNF408Q9H9D4 720 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 OLFML3Q9NRN5 406 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 HDAC6Q9UBN7 1215 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 GABBR1Q9UBS5 961 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 GAP43P17677 238 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 TEX35Q5T0J7 233 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 SEPT14Q6ZU15 432 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 JAKMIP2Q96AA8 810 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 TBC1D22BQ9NU19 505 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 BTBD7Q9P203 1132 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 GNA14O95837 355 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
PHF3-209ENST00000509330 PEX3P56589 373 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 PPP2R3AQ06190 1150 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 ZSWIM2Q8NEG5 633 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 NSUN6Q8TEA1 469 aaKnown RBP16.35■□□□□ 0.21
PHF3-209ENST00000509330 PLAGL2Q9UPG8 496 aa16.35■□□□□ 0.21
PHF3-209ENST00000509330 KIF11P52732 1056 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 SWSAP1Q6NVH7 229 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 ANKRD7Q92527 254 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 HOXC10Q9NYD6 342 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
PHF3-209ENST00000509330 WDR64B1ANS9 1081 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 SLC16A4O15374 487 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 MKRN3Q13064 507 aaKnown RBP16.34■□□□□ 0.21
PHF3-209ENST00000509330 PDXDC1Q6P996 788 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 FAM186BQ8IYM0 893 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 ZBTB9Q96C00 473 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.34■□□□□ 0.21
PHF3-209ENST00000509330 MRFAP1Q9Y605 127 aa16.34■□□□□ 0.21
PHF3-209ENST00000509330 A0A1W2PQJ5 194 aa16.33■□□□□ 0.21
PHF3-209ENST00000509330 CCDC169A6NNP5 214 aa16.33■□□□□ 0.21
PHF3-209ENST00000509330 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.21
PHF3-209ENST00000509330 AFPP02771 609 aaKnown RBP16.33■□□□□ 0.21
PHF3-209ENST00000509330 PHIPQ8WWQ0 1821 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 TLR2O60603 784 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 SRGAP2O75044 1071 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 SPA17Q15506 151 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 FIGNQ5HY92 759 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 GBP3Q9H0R5 595 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 MLXIPQ9HAP2 919 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 PPP2R3BQ9Y5P8 575 aa16.33■□□□□ 0.2
PHF3-209ENST00000509330 TUBB4AP04350 444 aa16.32■□□□□ 0.2
PHF3-209ENST00000509330 RPL13P26373 211 aaKnown RBP16.32■□□□□ 0.2
PHF3-209ENST00000509330 SP2Q02086 613 aa16.32■□□□□ 0.2
PHF3-209ENST00000509330 GHRHRQ02643 423 aa16.32■□□□□ 0.2
PHF3-209ENST00000509330 ANO5Q75V66 913 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms