RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 YTHDC1Q96MU7 727 aaKnown RBP18.27■□□□□ 0.52
CXCL1-202ENST00000509101 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 ERVK-5Q9HDB9 667 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 AAASQ9NRG9 546 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 NOC2LQ9Y3T9 749 aaKnown RBP18.27■□□□□ 0.52
CXCL1-202ENST00000509101 CFAP54Q96N23 3096 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 RPS6KA5O75582 802 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 ARP10275 920 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 ATF7P17544 494 aaPredicted RBP18.26■□□□□ 0.51
CXCL1-202ENST00000509101 ERVFC1P60507 584 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 ITGB3BPQ13352 177 aaPredicted RBP18.26■□□□□ 0.51
CXCL1-202ENST00000509101 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
CXCL1-202ENST00000509101 FAM102BQ5T8I3 360 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 PLPP4Q5VZY2 271 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 NME8Q8N427 588 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 COLGALT1Q8NBJ5 622 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 TMEM40Q8WWA1 233 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 MAP4K1Q92918 833 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 SNX27Q96L92 541 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 PPP1R16BQ96T49 567 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 CDCA3Q99618 268 aaPredicted RBP18.26■□□□□ 0.51
CXCL1-202ENST00000509101 ADAM2Q99965 735 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 CDHR5Q9HBB8 845 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 TMEM260Q9NX78 707 aa18.26■□□□□ 0.51
CXCL1-202ENST00000509101 MYO15AQ9UKN7 3530 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 ZFHX2Q9C0A1 2572 aaPredicted RBP18.25■□□□□ 0.51
CXCL1-202ENST00000509101 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 DDX39AO00148 427 aaKnown RBP18.25■□□□□ 0.51
CXCL1-202ENST00000509101 CALM1P0DP23 149 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 CALM2P0DP24 149 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 CALM3P0DP25 149 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 SP100P23497 879 aaPredicted RBP18.25■□□□□ 0.51
CXCL1-202ENST00000509101 KLRC1P26715 233 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 MCM5P33992 734 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 APOBRQ0VD83 1088 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 PTPN21Q16825 1174 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 TMTC3Q6ZXV5 915 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 ASIC4Q96FT7 647 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 TMEM87BQ96K49 555 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 MTA3Q9BTC8 594 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 APOL5Q9BWW9 433 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 AGO4Q9HCK5 861 aaKnown RBP18.25■□□□□ 0.51
CXCL1-202ENST00000509101 RGS18Q9NS28 235 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 C1orf112Q9NSG2 853 aa18.25■□□□□ 0.51
CXCL1-202ENST00000509101 C9IYK1 514 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 FSCN2O14926 492 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 ST18O60284 1047 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 SRGAP2BP0DMP2 458 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 FGFR1P11362 822 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 WWC2Q6AWC2 1192 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 LLGL2Q6P1M3 1020 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 MICU3Q86XE3 530 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 TMTC2Q8N394 836 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 LRRC2Q9BYS8 371 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
CXCL1-202ENST00000509101 ST3GAL5Q9UNP4 418 aa18.24■□□□□ 0.51
CXCL1-202ENST00000509101 CNTNAP5Q8WYK1 1306 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 COL1A2P08123 1366 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 BACH1O14867 736 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 GFRA3O60609 400 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 TECP42680 631 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 SLC26A2P50443 739 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 NAPAP54920 295 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 CEP55Q53EZ4 464 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 SLC24A5Q71RS6 500 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 ZBTB33Q86T24 672 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 CCDC60Q8IWA6 550 aaPredicted RBP18.23■□□□□ 0.51
CXCL1-202ENST00000509101 OSMRQ99650 979 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 ANO3Q9BYT9 981 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 CWH43Q9H720 699 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 ENTPD7Q9NQZ7 604 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
CXCL1-202ENST00000509101 SLC12A7Q9Y666 1083 aa18.23■□□□□ 0.51
CXCL1-202ENST00000509101 IGKV6D-21A0A0A0MT36 114 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 HBP1O60381 514 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 ATG7O95352 703 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 CCNE2O96020 404 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 LAG3P18627 525 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 LIFRP42702 1097 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 KIZQ2M2Z5 673 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 FAM160B1Q5W0V3 765 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 PDE12Q6L8Q7 609 aaKnown RBP18.22■□□□□ 0.51
CXCL1-202ENST00000509101 TYW1BQ6NUM6 668 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 ANKRD54Q6NXT1 300 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 FAM228AQ86W67 206 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 KIAA0319LQ8IZA0 1049 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 TCF25Q9BQ70 676 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 ATP6V0A4Q9HBG4 840 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 TMEM161AQ9NX61 479 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 MYO10Q9HD67 2058 aa18.22■□□□□ 0.51
CXCL1-202ENST00000509101 GPR182O15218 404 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 PDGFBP01127 241 aaPredicted RBP18.21■□□□□ 0.51
CXCL1-202ENST00000509101 AVPR2P30518 371 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 ADCY7P51828 1080 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 KCNC3Q14003 757 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 PDXDC2PQ6P474 469 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 SYCE2Q6PIF2 218 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 ABHD15Q6UXT9 468 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 FANCBQ8NB91 859 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms