RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 DPP8Q6V1X1 898 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 ARHGAP36Q6ZRI8 547 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 LARP4Q71RC2 724 aaKnown RBP eCLIP3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 DPH6Q7L8W6 267 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 MAMDC2Q7Z304 686 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 SGMS1Q86VZ5 419 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 ULK2Q8IYT8 1036 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 GPR135Q8IZ08 494 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 NLGN4XQ8N0W4 816 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 PCDH19Q8TAB3 1148 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 WNK4Q96J92 1243 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 SCYL1Q96KG9 808 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 AURKAIP1Q9NWT8 199 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 CBLCQ9ULV8 474 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 GIT1Q9Y2X7 761 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 CAPN14A8MX76 684 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 ZNF561-AS1K7EIQ3 104 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 ARVCFO00192 962 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 HMGCRP04035 888 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 HSP90B1P14625 803 aaKnown RBP3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 FBLP22087 321 aaKnown RBP3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 PTGS1P23219 599 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 ADCY8P40145 1251 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 KCNQ1P51787 676 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 WDR72Q3MJ13 1102 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 FIGNQ5HY92 759 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 TRIM68Q6AZZ1 485 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 SPATC1Q76KD6 591 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 C16orf59Q7L2K0 433 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 CXXC5Q7LFL8 322 aaKnown RBP3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 TMPRSS6Q8IU80 811 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 PTPRN2Q92932 1015 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 TMEM176AQ96HP8 235 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 SPATA9Q9BWV2 254 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 MSL2Q9HCI7 577 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 INCENPQ9NQS7 918 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 RIC8BQ9NVN3 520 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 PARPBPQ9NWS1 579 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 GALNT8Q9NY28 637 aa3.63□□□□□ -1.83
DEPDC1B-204ENST00000509006 AQP7O14520 342 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 RPS6KA4O75676 772 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 PYGMP11217 842 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 MC4RP32245 332 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 ADRA1BP35368 520 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 JAM2P57087 298 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 ZC3H6P61129 1189 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 HERVK_113P62684 666 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 MRPS21P82921 87 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 SLC25A3Q00325 362 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 HHEXQ03014 270 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 CRHR2Q13324 411 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 GRM7Q14831 915 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 SEC23AQ15436 765 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 FOXB2Q5VYV0 432 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 KANK2Q63ZY3 851 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 SPTY2D1Q68D10 685 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 LAIR1Q6GTX8 287 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 OSTM1Q86WC4 334 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 PTRH1Q86Y79 214 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 D2HGDHQ8N465 521 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 FBXW5Q969U6 566 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 BTBD2Q9BX70 525 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 AMNQ9BXJ7 453 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 SMURF1Q9HCE7 757 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 ARHGAP28Q9P2N2 729 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 FBXO10Q9UK96 956 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 PCDHA8Q9Y5H6 950 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 ATP23Q9Y6H3 246 aa3.62□□□□□ -1.83
DEPDC1B-204ENST00000509006 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 CLASP2O75122 1294 aaKnown RBP3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 CDK11BP21127 795 aaKnown RBP3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 PROZP22891 400 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 HGFACQ04756 655 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 RRP1BQ14684 758 aaKnown RBP3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 PCOLCEQ15113 449 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 FAM209AQ5JX71 171 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 TMEM200BQ69YZ2 307 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 USP30Q70CQ3 517 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 MTDHQ86UE4 582 aaKnown RBP3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 GLCCI1Q86VQ1 547 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 GPR150Q8NGU9 434 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 OR14K1Q8NGZ2 314 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 GPRC5BQ9NZH0 403 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 CDC42EP3Q9UKI2 254 aa3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 CDK11AQ9UQ88 783 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 TTBK1Q5TCY1 1321 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1B-204ENST00000509006 TRBV23-1A0A0A0MS06 115 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 TMEM191CA6NGB0 347 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 PDPK1O15530 556 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 SUMO1P63165 101 aaKnown RBP3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 LACTBP83111 547 aaPredicted RBP3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 RASGRF1Q13972 1273 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 TM4SF20Q53R12 229 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 FSTL4Q6MZW2 842 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 LRSAM1Q6UWE0 723 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 FILIP1Q7Z7B0 1213 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 NOSTRINQ8IVI9 506 aa3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 BCL6BQ8N143 479 aaPredicted RBP3.6□□□□□ -1.83
DEPDC1B-204ENST00000509006 ZBTB38Q8NAP3 1195 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms