RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 AMOTL2Q9Y2J4 779 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 ABCC5O15440 1437 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CD109Q6YHK3 1445 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 KIF13AQ9H1H9 1805 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 ANO9A1A5B4 782 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 RASA4BC9J798 803 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 SOCS7O14512 581 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 CDK2AP1O14519 115 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 RASA4O43374 803 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 PEX11AO75192 247 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 STAMBPO95630 424 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 CHRNB1P11230 501 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 ALAS1P13196 640 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 VHLP40337 213 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 CETN2P41208 172 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 HSD17B4P51659 736 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 C10orf76Q5T2E6 689 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 CCDC81Q6ZN84 652 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 RUFY3Q7L099 469 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 KIAA1958Q8N8K9 716 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 DDHD1Q8NEL9 900 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 CHMP6Q96FZ7 201 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 VPS33BQ9H267 617 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 TMBIM4Q9HC24 238 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 PAG1Q9NWQ8 432 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 RCOR1Q9UKL0 485 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF711Q9Y462 761 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 PCDHB4Q9Y5E5 795 aa11.66□□□□□ -0.54
PDLIM5-210ENST00000508216 RIMS2Q9UQ26 1411 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 O00370 1275 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 IGF2BP3O00425 579 aaKnown RBP eCLIP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 NVLO15381 856 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 CYP1A1P04798 512 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 ZFYP08048 801 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 SPATA31D3P0C874 917 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 AP3M2P53677 418 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 RAD23BP54727 409 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 KCNJ2P63252 427 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 KARSQ15046 597 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 BBS9Q3SYG4 887 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 SNX30Q5VWJ9 437 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 KIAA1841Q6NSI8 718 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 SPATA31D4Q6ZUB0 917 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 LONP2Q86WA8 852 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 CCNJLQ8IV13 435 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 ANGPTL6Q8NI99 470 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 ZFPM2Q8WW38 1151 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 TMA16Q96EY4 203 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 PBKQ96KB5 322 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 CTRCQ99895 268 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 NUF2Q9BZD4 464 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 CEP44Q9C0F1 390 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 PDGFDQ9GZP0 370 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 USP32Q8NFA0 1604 aa11.65□□□□□ -0.54
PDLIM5-210ENST00000508216 GRXCR2A6NFK2 248 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 NOTOA8MTQ0 251 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 LDHCP07864 332 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 IL32P24001 234 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 SERPINB3P29508 390 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 ARFIP2P53365 341 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 FOSBP53539 338 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 AK2P54819 239 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 COPS2P61201 443 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 LAPTM5Q13571 262 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 EPHA7Q15375 998 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 SF3B3Q15393 1217 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 CTC1Q2NKJ3 1217 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 FYB2Q5VWT5 728 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 OLFML2BQ68BL8 750 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 DHRS4L2Q6PKH6 230 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 DTHD1Q6ZMT9 781 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 TMEM151BQ8IW70 566 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 CADM3Q8N126 398 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 SH2D3CQ8N5H7 860 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 GPATCH3Q96I76 525 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 TMEM237Q96Q45 408 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 USP28Q96RU2 1077 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 HEPHQ9BQS7 1158 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 ALDH8A1Q9H2A2 487 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 EPB41L4AQ9HCS5 686 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 PPANQ9NQ55 473 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 ARMC1Q9NVT9 282 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 KLF15Q9UIH9 416 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 ATP10DQ9P241 1426 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 TRAPPC8Q9Y2L5 1435 aa11.64□□□□□ -0.55
PDLIM5-210ENST00000508216 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms