RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 PPP2R1AP30153 589 aa9.61□□□□□ -0.87
PFDN1-202ENST00000507185 C7orf61Q8IZ16 206 aa9.61□□□□□ -0.87
PFDN1-202ENST00000507185 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
PFDN1-202ENST00000507185 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
PFDN1-202ENST00000507185 SH3TC1Q8TE82 1336 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 C9IYK1 514 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 NUAK1O60285 661 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 TBC1D8O95759 1140 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 ATF4P18848 351 aaPredicted RBP9.6□□□□□ -0.87
PFDN1-202ENST00000507185 CTSKP43235 329 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 PMS1P54277 932 aaKnown RBP9.6□□□□□ -0.87
PFDN1-202ENST00000507185 PROSER3Q2NL68 480 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 NLRP10Q86W26 655 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 TAB3Q8N5C8 712 aaPredicted RBP9.6□□□□□ -0.87
PFDN1-202ENST00000507185 CDCA5Q96FF9 252 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 EYA3Q99504 573 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.6□□□□□ -0.87
PFDN1-202ENST00000507185 SCAF8Q9UPN6 1271 aaKnown RBP9.6□□□□□ -0.87
PFDN1-202ENST00000507185 TAF6LQ9Y6J9 622 aa9.6□□□□□ -0.87
PFDN1-202ENST00000507185 ASTN2O75129 1339 aaPredicted RBP9.59□□□□□ -0.87
PFDN1-202ENST00000507185 FADS2P1A8MWK0 482 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 ZNF205O95201 554 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 VAV1P15498 845 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 PNLIPP16233 465 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 GPSM2P81274 684 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 BMS1Q14692 1282 aaKnown RBP9.59□□□□□ -0.87
PFDN1-202ENST00000507185 SLC10A5Q5PT55 438 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 GALNT18Q6P9A2 607 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 CRTC3Q6UUV7 619 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 DPF2Q92785 391 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 SGPP1Q9BX95 441 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 PPT2Q9UMR5 302 aa9.59□□□□□ -0.87
PFDN1-202ENST00000507185 GPR55Q9Y2T6 319 aaPredicted RBP9.59□□□□□ -0.87
PFDN1-202ENST00000507185 WTIPA6NIX2 430 aaPredicted RBP9.58□□□□□ -0.88
PFDN1-202ENST00000507185 GSNP06396 782 aa9.58□□□□□ -0.88
PFDN1-202ENST00000507185 RPS12P25398 132 aaKnown RBP9.58□□□□□ -0.88
PFDN1-202ENST00000507185 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
PFDN1-202ENST00000507185 TDRD10Q5VZ19 366 aaKnown RBP9.58□□□□□ -0.88
PFDN1-202ENST00000507185 EGFLAMQ63HQ2 1017 aa9.58□□□□□ -0.88
PFDN1-202ENST00000507185 RASAL3Q86YV0 1011 aa9.58□□□□□ -0.88
PFDN1-202ENST00000507185 CELF1Q92879 486 aaKnown RBP9.58□□□□□ -0.88
PFDN1-202ENST00000507185 GPRASP2Q96D09 838 aa9.58□□□□□ -0.88
PFDN1-202ENST00000507185 PLCD4Q9BRC7 762 aa9.58□□□□□ -0.88
PFDN1-202ENST00000507185 ERVK13-1Q9NX77 482 aa9.58□□□□□ -0.88
PFDN1-202ENST00000507185 LAS1LQ9Y4W2 734 aaKnown RBP9.58□□□□□ -0.88
PFDN1-202ENST00000507185 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
PFDN1-202ENST00000507185 UBE2Q2LH0YL09 131 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 UFL1O94874 794 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
PFDN1-202ENST00000507185 PRKG1Q13976 671 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 HSF5Q4G112 596 aaPredicted RBP9.57□□□□□ -0.88
PFDN1-202ENST00000507185 NOL9Q5SY16 702 aaKnown RBP9.57□□□□□ -0.88
PFDN1-202ENST00000507185 PRAMEF18Q5VWM3 479 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 CWF19L1Q69YN2 538 aaKnown RBP9.57□□□□□ -0.88
PFDN1-202ENST00000507185 MOB2Q70IA6 237 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 JAZF1Q86VZ6 243 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 RBBP8NLQ8NC74 664 aaPredicted RBP9.57□□□□□ -0.88
PFDN1-202ENST00000507185 FAM89AQ96GI7 184 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 IRF2BPLQ9H1B7 796 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 POLLQ9UGP5 575 aa9.57□□□□□ -0.88
PFDN1-202ENST00000507185 RTL9Q8NET4 1388 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 SHOXO15266 292 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 TP53P04637 393 aaPredicted RBP9.56□□□□□ -0.88
PFDN1-202ENST00000507185 GUCY2CP25092 1073 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 ARL4AP40617 200 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 DCAF15Q66K64 600 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 CRBNQ96SW2 442 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 GCM1Q9NP62 436 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 SIRT5Q9NXA8 310 aa9.56□□□□□ -0.88
PFDN1-202ENST00000507185 CNOT6Q9ULM6 557 aaKnown RBP9.56□□□□□ -0.88
PFDN1-202ENST00000507185 A0A1W2PQ45 241 aaPredicted RBP9.55□□□□□ -0.88
PFDN1-202ENST00000507185 A0A1W2PQY0 241 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 HRKO00198 91 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 SDHBP21912 280 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 PKN2Q16513 984 aaKnown RBP9.55□□□□□ -0.88
PFDN1-202ENST00000507185 ANKRD39Q53RE8 183 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 UNC5AQ6ZN44 842 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 RUFY4Q6ZNE9 571 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 PPFIBP1Q86W92 1011 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 TBC1D16Q8TBP0 767 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 GCC1Q96CN9 775 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 FAM86C1Q9NVL1 165 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 CASP8AP2Q9UKL3 1982 aa9.55□□□□□ -0.88
PFDN1-202ENST00000507185 GSTM1P09488 218 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 NF2P35240 595 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 RIPK4P57078 832 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 COL9A2Q14055 689 aaPredicted RBP9.54□□□□□ -0.88
PFDN1-202ENST00000507185 KIR3DS1Q14943 382 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 TCEAL1Q15170 157 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 ZYXQ15942 572 aaKnown RBP9.54□□□□□ -0.88
PFDN1-202ENST00000507185 AXDND1Q5T1B0 1012 aaPredicted RBP9.54□□□□□ -0.88
PFDN1-202ENST00000507185 OLFML2BQ68BL8 750 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 SLCO6A1Q86UG4 719 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 NAT16Q8N8M0 369 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 PNNQ9H307 717 aaKnown RBP9.54□□□□□ -0.88
PFDN1-202ENST00000507185 GP6Q9HCN6 339 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms