RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 AASDHPPTQ9NRN7 309 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 USP36Q9P275 1121 aaKnown RBP7.94□□□□□ -1.14
HERC4-213ENST00000506515 KCNG1Q9UIX4 513 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 PCDHA5Q9Y5H7 936 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 EID1Q9Y6B2 187 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 IRS2Q9Y4H2 1338 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 NFIBO00712 420 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 CLEC2LP0C7M8 214 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 TAL1P17542 331 aaPredicted RBP7.93□□□□□ -1.14
HERC4-213ENST00000506515 EPHB3P54753 998 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 EPHB1P54762 984 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 PHF19Q5T6S3 580 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 TIGD7Q6NT04 549 aaPredicted RBP7.93□□□□□ -1.14
HERC4-213ENST00000506515 ESPNLQ6ZVH7 1005 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 CXorf67Q86X51 503 aaPredicted RBP7.93□□□□□ -1.14
HERC4-213ENST00000506515 MZB1Q8WU39 189 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 LMBR1Q8WVP7 490 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 CHMP4CQ96CF2 233 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 FUBP3Q96I24 572 aaKnown RBP eCLIP7.93□□□□□ -1.14
HERC4-213ENST00000506515 MYL10Q9BUA6 226 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 INCENPQ9NQS7 918 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 TCEAL9Q9UHQ7 104 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 SPEF1Q9Y4P9 236 aa7.93□□□□□ -1.14
HERC4-213ENST00000506515 TEX51A0A1B0GUA7 166 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 SHTN1A0MZ66 631 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 H2AFYO75367 372 aaKnown RBP7.92□□□□□ -1.14
HERC4-213ENST00000506515 PRPF6O94906 941 aaKnown RBP7.92□□□□□ -1.14
HERC4-213ENST00000506515 MPIG6BO95866 241 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 PRLP01236 227 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 CCND1P24385 295 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 GLRBP48167 497 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 ALDH6A1Q02252 535 aaKnown RBP7.92□□□□□ -1.14
HERC4-213ENST00000506515 SKIDA1Q1XH10 827 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 INAVAQ3KP66 663 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 LRSAM1Q6UWE0 723 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 C1orf162Q8NEQ5 155 aaPredicted RBP7.92□□□□□ -1.14
HERC4-213ENST00000506515 IGDCC4Q8TDY8 1250 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 HOOK2Q96ED9 719 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 MAML3Q96JK9 1138 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 AMNQ9BXJ7 453 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 MKS1Q9NXB0 559 aa7.92□□□□□ -1.14
HERC4-213ENST00000506515 ELL2O00472 640 aaPredicted RBP7.91□□□□□ -1.14
HERC4-213ENST00000506515 GPR3P46089 330 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 RGS3P49796 1198 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 RAB27AP51159 221 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 ROM1Q03395 351 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 MYBPC3Q14896 1274 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 PCBP2Q15366 365 aaKnown RBP eCLIP7.91□□□□□ -1.14
HERC4-213ENST00000506515 CLUL1Q15846 466 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 CT83Q5H943 113 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 SLFN12LQ6IEE8 588 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 B3GNT8Q7Z7M8 397 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 FMNL3Q8IVF7 1028 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 IGDCC3Q8IVU1 814 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 FAXDC2Q96IV6 333 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 ZSWIM3Q96MP5 696 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 ACAP3Q96P50 834 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 FOXB1Q99853 325 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 DLL4Q9NR61 685 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 GALNT8Q9NY28 637 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 CHPF2Q9P2E5 772 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 ARHGAP20Q9P2F6 1191 aa7.91□□□□□ -1.14
HERC4-213ENST00000506515 CFBP00751 764 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 FOXO4P98177 505 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 ADCY2Q08462 1091 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 ZBTB41Q5SVQ8 909 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 CCDC62Q6P9F0 684 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 UNQ6494/PRO21346Q6UXR6 183 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 PNMA8AQ86V59 439 aaPredicted RBP7.9□□□□□ -1.14
HERC4-213ENST00000506515 DTX3Q8N9I9 347 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 FBXO15Q8NCQ5 510 aaPredicted RBP7.9□□□□□ -1.14
HERC4-213ENST00000506515 CALML6Q8TD86 181 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 KCNN1Q92952 543 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 TMEM209Q96SK2 561 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 GORASP1Q9BQQ3 440 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 EDARQ9UNE0 448 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 PPP2R3BQ9Y5P8 575 aa7.9□□□□□ -1.14
HERC4-213ENST00000506515 PRSS38A1L453 326 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 N4BP3O15049 544 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 SEMA7AO75326 666 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 ECE1P42892 770 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 LIMS1P48059 325 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 MANFP55145 182 aaKnown RBP7.89□□□□□ -1.15
HERC4-213ENST00000506515 ITGA1P56199 1179 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 TTLL7Q6ZT98 887 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 WDR48Q8TAF3 677 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 EAF2Q96CJ1 260 aaPredicted RBP7.89□□□□□ -1.15
HERC4-213ENST00000506515 TACO1Q9BSH4 297 aaKnown RBP7.89□□□□□ -1.15
HERC4-213ENST00000506515 QRSL1Q9H0R6 528 aaKnown RBP7.89□□□□□ -1.15
HERC4-213ENST00000506515 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 CCM2LQ9NUG4 571 aaPredicted RBP7.89□□□□□ -1.15
HERC4-213ENST00000506515 ZIM2Q9NZV7 527 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 ZFP69BQ9UJL9 534 aa7.89□□□□□ -1.15
HERC4-213ENST00000506515 ST20-MTHFSA0A0A6YYL1 179 aa7.88□□□□□ -1.15
HERC4-213ENST00000506515 AKAP10O43572 662 aa7.88□□□□□ -1.15
HERC4-213ENST00000506515 XPOTO43592 962 aaKnown RBP7.88□□□□□ -1.15
HERC4-213ENST00000506515 LPLP06858 475 aa7.88□□□□□ -1.15
HERC4-213ENST00000506515 ENPP1P22413 925 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms