RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TUBGCP5Q96RT8 1024 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 VTA1Q9NP79 307 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 UBA6A0AVT1 1052 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 DDX3XO00571 662 aaKnown RBP eCLIP5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 RAB11FIP3O75154 756 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 ULK1O75385 1050 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 RGS3P49796 1198 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 ANAPC15P60006 121 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 SLC6A3Q01959 620 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 ALDH6A1Q02252 535 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 ADCY1Q08828 1119 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 TTC38Q5R3I4 469 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 GPR158Q5T848 1215 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 RASSF3Q86WH2 238 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 SPATS2Q86XZ4 545 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 RPUSD2Q8IZ73 545 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 WDR48Q8TAF3 677 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 E2F7Q96AV8 911 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 BTBD2Q9BX70 525 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 SEMA4AQ9H3S1 761 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 KCND1Q9NSA2 647 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 SLC5A4Q9NY91 659 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 MSRAQ9UJ68 235 aa5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 NOC2LQ9Y3T9 749 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-204ENST00000505804 CYP7B1O75881 506 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 APOL3O95236 402 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 PRLP01236 227 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 RPL13P26373 211 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 GUCY2FP51841 1108 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 SESN3P58005 492 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 IL13RA1P78552 427 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 PRAMEF9Q5VWM5 478 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 CIAPIN1Q6FI81 312 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 TRMT10BQ6PF06 316 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 DPP8Q6V1X1 898 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 PHYKPLQ8IUZ5 450 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 CMIPQ8IY22 773 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 CALML6Q8TD86 181 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 ZCCHC14Q8WYQ9 949 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 WRNIP1Q96S55 665 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 FOXB1Q99853 325 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 MYL10Q9BUA6 226 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 ZDHHC5Q9C0B5 715 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 POFUT1Q9H488 388 aa5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 TOPORSQ9NS56 1045 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-204ENST00000505804 SH3D21A4FU49 640 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 ELL2O00472 640 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 PRKD3O94806 890 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 PRPF6O94906 941 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 KNG1P01042 644 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 COL6A1P12109 1028 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 CFPP27918 469 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 SARSP49591 514 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 CD83Q01151 205 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 CAP1Q01518 475 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 ROM1Q03395 351 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 NOLC1Q14978 699 aaKnown RBP eCLIP5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 STILQ15468 1287 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 TCERG1LQ5VWI1 586 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 SLFN12LQ6IEE8 588 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 TIGD7Q6NT04 549 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 FRMD7Q6ZUT3 714 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 C7orf31Q8N865 590 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 LINC01356Q8N9X3 169 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 TP53I13Q8NBR0 393 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 ANO3Q9BYT9 981 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 TRIM8Q9BZR9 551 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 OR10A5Q9H207 317 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 NTMQ9P121 344 aa5.58□□□□□ -1.52
TOPBP1-204ENST00000505804 WASHC2CQ9Y4E1 1318 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 ZNF28P17035 718 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 APEX1P27695 318 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 ADCY8P40145 1251 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 MYBPC3Q14896 1274 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 PDCD1Q15116 288 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 WDR72Q3MJ13 1102 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 KANK2Q63ZY3 851 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 MCTP2Q6DN12 878 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 UNQ6494/PRO21346Q6UXR6 183 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 TMEM151BQ8IW70 566 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 CARFQ8N187 725 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 SPATA25Q9BR10 227 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 L2HGDHQ9H9P8 463 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 HOMER2Q9NSB8 354 aa5.57□□□□□ -1.52
TOPBP1-204ENST00000505804 DBX1A6NMT0 343 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 H0Y858 1186 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 KDM1AO60341 852 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 KATNA1O75449 491 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 KLHL18O94889 574 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 CHGBP05060 677 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 SCAND1P57086 179 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 ADCY2Q08462 1091 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 ITKQ08881 620 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 FAPQ12884 760 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 MTMR1Q13613 665 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 MOGSQ13724 837 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms