RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 MOXD1Q6UVY6 613 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 NELFCDQ8IXH7 590 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 TSEN2Q8NCE0 465 aaKnown RBP18.58■□□□□ 0.56
LIN54-204ENST00000505397 TBC1D5Q92609 795 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 ZNF341Q9BYN7 854 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 BTNL10A8MVZ5 291 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 PHF20L1A8MW92 1017 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 MRPS25P82663 173 aaKnown RBP18.57■□□□□ 0.56
LIN54-204ENST00000505397 APBA1Q02410 837 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 HERC4Q5GLZ8 1057 aaPredicted RBP18.57■□□□□ 0.56
LIN54-204ENST00000505397 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
LIN54-204ENST00000505397 RASSF4Q9H2L5 321 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 SPON1Q9HCB6 807 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 ASTN2O75129 1339 aaPredicted RBP18.57■□□□□ 0.56
LIN54-204ENST00000505397 A0A087X0T9 212 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 MED24O75448 989 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
LIN54-204ENST00000505397 FAM228BP0C875 321 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 ADAM9Q13443 819 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 GLIS2Q9BZE0 524 aaPredicted RBP18.57■□□□□ 0.56
LIN54-204ENST00000505397 FEM1BQ9UK73 627 aa18.57■□□□□ 0.56
LIN54-204ENST00000505397 SPIRE1Q08AE8 756 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 CCDC174Q6PII3 467 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 GINM1Q9NU53 330 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 OPA1O60313 960 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 PLA2G6O60733 806 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 PPFIA1Q13136 1202 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 DCAF15Q66K64 600 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 INPP4AQ96PE3 977 aaPredicted RBP18.56■□□□□ 0.56
LIN54-204ENST00000505397 TRAF3IP3Q9Y228 551 aa18.56■□□□□ 0.56
LIN54-204ENST00000505397 CTNND1O60716 968 aaKnown RBP18.55■□□□□ 0.56
LIN54-204ENST00000505397 GLI1P08151 1106 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 CACNB1Q02641 598 aaPredicted RBP18.55■□□□□ 0.56
LIN54-204ENST00000505397 KCNH2Q12809 1159 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 GBP6Q6ZN66 633 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 APOBEC3FQ8IUX4 373 aaKnown RBP18.55■□□□□ 0.56
LIN54-204ENST00000505397 IFT20Q8IY31 132 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 SLFN12Q8IYM2 578 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 RANBP17Q9H2T7 1088 aaKnown RBP18.55■□□□□ 0.56
LIN54-204ENST00000505397 SMCHD1A6NHR9 2005 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 LMNB1P20700 586 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 IRAK1P51617 712 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 NAP1L1P55209 391 aaKnown RBP18.55■□□□□ 0.56
LIN54-204ENST00000505397 ARHGAP4P98171 946 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 RAPGEF1Q13905 1077 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 C10orf67Q8IYJ2 551 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 ETNPPLQ8TBG4 499 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 PLCB1Q9NQ66 1216 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 RSPH14Q9UHP6 348 aa18.55■□□□□ 0.56
LIN54-204ENST00000505397 CES2O00748 559 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 CETN3O15182 167 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 TAL1P17542 331 aaPredicted RBP18.54■□□□□ 0.56
LIN54-204ENST00000505397 KLHL30Q0D2K2 578 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 EPM2AIP1Q7L775 607 aaPredicted RBP18.54■□□□□ 0.56
LIN54-204ENST00000505397 IRF2BP2Q7Z5L9 587 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 FRMD5Q7Z6J6 570 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 FAM133AQ8N9E0 248 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 ADAMTS1Q9UHI8 967 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 ASIC2Q16515 512 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 KIAA0753Q2KHM9 967 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 C10orf76Q5T2E6 689 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 PACSIN1Q9BY11 444 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 TMEM59LQ9UK28 342 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 DOCK1Q14185 1865 aa18.54■□□□□ 0.56
LIN54-204ENST00000505397 FTCDO95954 541 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 HOXD13P35453 343 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 STAT3P40763 770 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 CASP5P51878 434 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 GIT2Q14161 759 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 TTMPQ5BVD1 217 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 ANGEL2Q5VTE6 544 aaKnown RBP18.53■□□□□ 0.56
LIN54-204ENST00000505397 CATSPER3Q86XQ3 398 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 IQCKQ8N0W5 287 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 GPC2Q8N158 579 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 MREGQ8N565 214 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 LPAR1Q92633 364 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 TBX3O15119 743 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 NR2F2P24468 414 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 HOXA13P31271 388 aaPredicted RBP18.53■□□□□ 0.56
LIN54-204ENST00000505397 CORO7P57737 925 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 SKOR1P84550 965 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 Q4G0T1 1027 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 NBPF12Q5TAG4 269 aaPredicted RBP18.53■□□□□ 0.56
LIN54-204ENST00000505397 SYT2Q8N9I0 419 aaPredicted RBP18.53■□□□□ 0.56
LIN54-204ENST00000505397 P2RX7Q99572 595 aaKnown RBP18.53■□□□□ 0.56
LIN54-204ENST00000505397 GRIN2DO15399 1336 aa18.53■□□□□ 0.56
LIN54-204ENST00000505397 POTEFA5A3E0 1075 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 PIK3CDO00329 1044 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 WDR46O15213 610 aaKnown RBP18.52■□□□□ 0.56
LIN54-204ENST00000505397 HSF2BPO75031 334 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 CFBP00751 764 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 POTEIP0CG38 1075 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 MYBP10242 640 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 SREBF1P36956 1147 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 CARSP49589 748 aaKnown RBP18.52■□□□□ 0.56
LIN54-204ENST00000505397 POTEGQ6S5H5 508 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 POTEEQ6S8J3 1075 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 FBXO28Q9NVF7 368 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms