RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 GSDMAQ96QA5 445 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 NACC1Q96RE7 527 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 C7orf25Q9BPX7 421 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 SENP7Q9BQF6 1050 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 TINF2Q9BSI4 451 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 BCAS3Q9H6U6 928 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 ZSWIM4Q9H7M6 989 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
TPM3-218ENST00000505010 EXOC1Q9NV70 894 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.41□□□□□ -0.74
TPM3-218ENST00000505010 WRAP73Q9P2S5 460 aaPredicted RBP10.41□□□□□ -0.74
TPM3-218ENST00000505010 DACH1Q9UI36 760 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 ATP11BQ9Y2G3 1177 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 DIS3Q9Y2L1 958 aaKnown RBP10.41□□□□□ -0.74
TPM3-218ENST00000505010 PCDHA10Q9Y5I2 948 aa10.41□□□□□ -0.74
TPM3-218ENST00000505010 SYNGAP1Q96PV0 1343 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 DNM1LO00429 736 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 BACH1O14867 736 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 MSCO60682 206 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 CAVIN2O95810 425 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 SUPT20HL2P0C7V6 817 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 TGFB3P10600 412 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 CNGA1P29973 690 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 ZNF165P49910 485 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 SLC12A3P55017 1021 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 PSMC5P62195 406 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 TTLL4Q14679 1199 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 LY6KQ17RY6 165 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 KMT5BQ4FZB7 885 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 MFSD14CQ5VZR4 134 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 MAMDC4Q6UXC1 1216 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 KCTD17Q8N5Z5 321 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 SPATA20Q8TB22 786 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 BADQ92934 168 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 ATP6V0A1Q93050 837 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 APBA2Q99767 749 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 BHMT2Q9H2M3 363 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 MLXIPQ9HAP2 919 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 CBX8Q9HC52 389 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 PRDM5Q9NQX1 630 aaPredicted RBP10.4□□□□□ -0.74
TPM3-218ENST00000505010 PDGFCQ9NRA1 345 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 GABBR1Q9UBS5 961 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
TPM3-218ENST00000505010 DDX41Q9UJV9 622 aaKnown RBP10.4□□□□□ -0.74
TPM3-218ENST00000505010 ZHX1Q9UKY1 873 aaPredicted RBP10.4□□□□□ -0.74
TPM3-218ENST00000505010 TELO2Q9Y4R8 837 aa10.4□□□□□ -0.74
TPM3-218ENST00000505010 NPHP3-ACAD11A0A0J9YXS1 232 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 ARHGEF35A5YM69 484 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 NOP56O00567 594 aaKnown RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 KLRC4O43908 158 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 DKC1O60832 514 aaKnown RBP eCLIP10.39□□□□□ -0.75
TPM3-218ENST00000505010 SNAI1O95863 264 aaPredicted RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 TXNP10599 105 aaKnown RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 IDEP14735 1019 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 CYP11B2P19099 503 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 BMP6P22004 513 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 RAD51AP2Q09MP3 1159 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 KCNB1Q14721 858 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 ZNF658Q5TYW1 1059 aaPredicted RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 METTL7BQ6UX53 244 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 UNC13DQ70J99 1090 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 LUZP1Q86V48 1076 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 CCDC60Q8IWA6 550 aaPredicted RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 SMYD4Q8IYR2 804 aaPredicted RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 MSL3Q8N5Y2 521 aaKnown RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 AOPEPQ8N6M6 819 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 SYT2Q8N9I0 419 aaPredicted RBP10.39□□□□□ -0.75
TPM3-218ENST00000505010 MLKLQ8NB16 471 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 DDX12PQ92771 950 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 RUSC1Q9BVN2 902 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 KATNBL1Q9H079 304 aa10.39□□□□□ -0.75
TPM3-218ENST00000505010 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 IGSF9BQ9UPX0 1349 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 BECN2A8MW95 431 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 GOLGA6L19H0YKK7 550 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 ZBTB39O15060 712 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 LYPLA2O95372 231 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 HOXC6P09630 235 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 YWHABP31946 246 aaKnown RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 ADCYAP1R1P41586 468 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 PRKCEQ02156 737 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 CACNB1Q02641 598 aaPredicted RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 COASYQ13057 564 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 CELF3Q5SZQ8 465 aaKnown RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 FAM160B1Q5W0V3 765 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 PLA2G4FQ68DD2 849 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 KLHL10Q6JEL2 608 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 SWSAP1Q6NVH7 229 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 TAPT1Q6NXT6 567 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 CNNM4Q6P4Q7 775 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 CCDC62Q6P9F0 684 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 ABHD15Q6UXT9 468 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 SLC39A5Q6ZMH5 540 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 TRMT1LQ7Z2T5 733 aaKnown RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 CCDC65Q8IXS2 484 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 DHX37Q8IY37 1157 aaKnown RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 USP38Q8NB14 1042 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 ARRDC4Q8NCT1 418 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms