RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 PRRG2O14669 202 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 TGM5O43548 720 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 PRICKLE3O43900 615 aaPredicted RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 FOXD2O60548 495 aaPredicted RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 KATNA1O75449 491 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 APOL3O95236 402 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 CYP17A1P05093 508 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 PFKPQ01813 784 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 ITKQ08881 620 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 DBPQ10586 325 aaPredicted RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 SMAD4Q13485 552 aaKnown RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 PRAMEF18Q5VWM3 479 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 ESRP1Q6NXG1 681 aaKnown RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 LIPIQ6XZB0 460 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 FERMT3Q86UX7 667 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 RPUSD2Q8IZ73 545 aaKnown RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 LINC01356Q8N9X3 169 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 CPA5Q8WXQ8 436 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 RTF1Q92541 710 aaKnown RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 SMAD5Q99717 465 aaKnown RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 NGRNQ9NPE2 291 aaKnown RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 NOC2LQ9Y3T9 749 aaKnown RBP4.39□□□□□ -1.71
RFC1-209ENST00000504974 PMF1-BGLAPU3KQ54 211 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 NCANO14594 1321 aa4.39□□□□□ -1.71
RFC1-209ENST00000504974 ADAMTS20P59510 1910 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 DCAF1Q9Y4B6 1507 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.38□□□□□ -1.71
RFC1-209ENST00000504974 ULK1O75385 1050 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 ENO2P09104 434 aaPredicted RBP4.38□□□□□ -1.71
RFC1-209ENST00000504974 PTGS1P23219 599 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 CD40P25942 277 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 LSP1P33241 339 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 SLURP1P55000 103 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 HERVK_113P62684 666 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 TERF2Q15554 542 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 SKIDA1Q1XH10 827 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 PRAMEF9Q5VWM5 478 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 B3GNT8Q7Z7M8 397 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 TMEM151BQ8IW70 566 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 C7orf31Q8N865 590 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 CLRN3Q8NCR9 226 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 ZBTB8AQ96BR9 441 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 SCYL1Q96KG9 808 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 TUBGCP5Q96RT8 1024 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 GORASP1Q9BQQ3 440 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 DDX56Q9NY93 547 aaKnown RBP4.38□□□□□ -1.71
RFC1-209ENST00000504974 MSRAQ9UJ68 235 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 CROTQ9UKG9 612 aa4.38□□□□□ -1.71
RFC1-209ENST00000504974 UBA6A0AVT1 1052 aaPredicted RBP4.37□□□□□ -1.71
RFC1-209ENST00000504974 ZNF839A8K0R7 811 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 ALG1L2C9J202 215 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 KDM1AO60341 852 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 PRKD3O94806 890 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 SASH1O94885 1247 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 FBXO21O94952 628 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 AOAHP28039 575 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 SDHAP31040 664 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 FNTBP49356 437 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 ITGA1P56199 1179 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 SCAND1P57086 179 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 SESN3P58005 492 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 SMAD3P84022 425 aaKnown RBP4.37□□□□□ -1.71
RFC1-209ENST00000504974 SLC6A3Q01959 620 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 NFIXQ14938 502 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 SMAD2Q15796 467 aaKnown RBP4.37□□□□□ -1.71
RFC1-209ENST00000504974 ZZZ3Q8IYH5 903 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 CNTD1Q8N815 330 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 AHCYL2Q96HN2 611 aaKnown RBP4.37□□□□□ -1.71
RFC1-209ENST00000504974 CLIC6Q96NY7 704 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 TMEM209Q96SK2 561 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 CEP89Q96ST8 783 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 TACO1Q9BSH4 297 aaKnown RBP4.37□□□□□ -1.71
RFC1-209ENST00000504974 CCDC8Q9H0W5 538 aaPredicted RBP4.37□□□□□ -1.71
RFC1-209ENST00000504974 POFUT1Q9H488 388 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 ZMAT4Q9H898 229 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 VTA1Q9NP79 307 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 INCENPQ9NQS7 918 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 SPATA6Q9NWH7 488 aaPredicted RBP4.37□□□□□ -1.71
RFC1-209ENST00000504974 ARHGAP20Q9P2F6 1191 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 ZFP69BQ9UJL9 534 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 WASF3Q9UPY6 502 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 ASB1Q9Y576 335 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 DUSP10Q9Y6W6 482 aa4.37□□□□□ -1.71
RFC1-209ENST00000504974 HSP90B1P14625 803 aaKnown RBP4.36□□□□□ -1.71
RFC1-209ENST00000504974 HTRA3P83110 453 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 MTMR1Q13613 665 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 EPHA7Q15375 998 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 BRDTQ58F21 947 aaPredicted RBP4.36□□□□□ -1.71
RFC1-209ENST00000504974 TTC38Q5R3I4 469 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 NT5DC1Q5TFE4 455 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 SLFN12LQ6IEE8 588 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 LRSAM1Q6UWE0 723 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 NECAB2Q7Z6G3 386 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 PROSER1Q86XN7 944 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 NME9Q86XW9 330 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 STPG3Q8N7X2 389 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 ZNF610Q8N9Z0 462 aa4.36□□□□□ -1.71
RFC1-209ENST00000504974 IGDCC4Q8TDY8 1250 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms