RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TMEM150BA6NC51 233 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 ZBTB42B2RXF5 422 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 ZNF862O60290 1169 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 GJB5O95377 273 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 MMP1P03956 469 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 VTNP04004 478 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 OATP04181 439 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 SFNP31947 248 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 CLCN3P51790 818 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 TAP1Q03518 808 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 TMEM266Q2M3C6 531 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
HOXC9-202ENST00000504557 LRRC71Q8N4P6 559 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 ZNF668Q96K58 619 aaPredicted RBP16.06■□□□□ 0.16
HOXC9-202ENST00000504557 CELF4Q9BZC1 486 aaKnown RBP16.06■□□□□ 0.16
HOXC9-202ENST00000504557 AGO3Q9H9G7 860 aaKnown RBP16.06■□□□□ 0.16
HOXC9-202ENST00000504557 SEPT9Q9UHD8 586 aaPredicted RBP16.06■□□□□ 0.16
HOXC9-202ENST00000504557 PRRC2BQ5JSZ5 2229 aaKnown RBP16.05■□□□□ 0.16
HOXC9-202ENST00000504557 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.05■□□□□ 0.16
HOXC9-202ENST00000504557 EPOPA6NHQ4 379 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 C22orf31O95567 290 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 NFX1Q12986 1120 aaKnown RBP16.05■□□□□ 0.16
HOXC9-202ENST00000504557 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 MOXD1Q6UVY6 613 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 TSHZ1Q6ZSZ6 1077 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 RPAINQ86UA6 219 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 FAM184AQ8NB25 1140 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 APBB2Q92870 758 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 C8orf76Q96K31 380 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 FAM167AQ96KS9 214 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
HOXC9-202ENST00000504557 MBOAT7Q96N66 472 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 YME1L1Q96TA2 773 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 RAD9AQ99638 391 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 NRBP2Q9NSY0 501 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 AKT3Q9Y243 479 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 CHD9Q3L8U1 2897 aa16.05■□□□□ 0.16
HOXC9-202ENST00000504557 TTC3P53804 2025 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 ARID2Q68CP9 1835 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 EML1O00423 815 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 GCFC2P16383 781 aaKnown RBP16.04■□□□□ 0.16
HOXC9-202ENST00000504557 RBM25P49756 843 aaKnown RBP16.04■□□□□ 0.16
HOXC9-202ENST00000504557 PAK2Q13177 524 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 KIZQ2M2Z5 673 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 EFCAB12Q6NXP0 572 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 USP38Q8NB14 1042 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 CDHR5Q9HBB8 845 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 CEP131Q9UPN4 1083 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 EYSQ5T1H1 3165 aa16.04■□□□□ 0.16
HOXC9-202ENST00000504557 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 RPLP2P05387 115 aaKnown RBP16.03■□□□□ 0.16
HOXC9-202ENST00000504557 GNL2Q13823 731 aaKnown RBP16.03■□□□□ 0.16
HOXC9-202ENST00000504557 RABEP1Q15276 862 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
HOXC9-202ENST00000504557 PPP4R3AQ6IN85 833 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 NME8Q8N427 588 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 GDPD5Q8WTR4 605 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 TNFRSF25Q93038 417 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 OSMRQ99650 979 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 NAP1L4Q99733 375 aaKnown RBP16.03■□□□□ 0.16
HOXC9-202ENST00000504557 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
HOXC9-202ENST00000504557 PADI3Q9ULW8 664 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 INSL6Q9Y581 213 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 CHD7Q9P2D1 2997 aa16.03■□□□□ 0.16
HOXC9-202ENST00000504557 LINC01553A4QN01 128 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 WNT7AO00755 349 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 ST18O60284 1047 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
HOXC9-202ENST00000504557 TBC1D8BQ0IIM8 1120 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
HOXC9-202ENST00000504557 PLA2G4FQ68DD2 849 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.02■□□□□ 0.16
HOXC9-202ENST00000504557 RDM1Q8NG50 284 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 HAS1Q92839 578 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 TOP1MTQ969P6 601 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 FAM20AQ96MK3 541 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 LLPHQ9BRT6 129 aaKnown RBP16.02■□□□□ 0.16
HOXC9-202ENST00000504557 KCNMB3Q9NPA1 279 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 PRDM6Q9NQX0 595 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 VAV3Q9UKW4 847 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 KIAA1671Q9BY89 1806 aa16.02■□□□□ 0.16
HOXC9-202ENST00000504557 RALGAPA2Q2PPJ7 1873 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 ENPP3O14638 875 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 MAGEB2O15479 319 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 RPS6KA5O75582 802 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 TMOD1P28289 359 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 NLRP11P59045 1033 aaKnown RBP16.01■□□□□ 0.15
HOXC9-202ENST00000504557 CYP4A11Q02928 519 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 SKIV2LQ15477 1246 aaKnown RBP16.01■□□□□ 0.15
HOXC9-202ENST00000504557 CALCRLQ16602 461 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 TGS1Q96RS0 853 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms