RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 EIF6P56537 245 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 USP46P62068 366 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 KCNC4Q03721 635 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 DMPKQ09013 629 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 DPYSQ14117 519 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 PLCB4Q15147 1175 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SND1Q7KZF4 910 aaKnown RBP eCLIP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 RUFY3Q7L099 469 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 DHX32Q7L7V1 743 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 NANOGNBQ7Z5D8 188 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 UBE2Q1Q7Z7E8 422 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 FCHSD1Q86WN1 690 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 NT5DC4Q86YG4 428 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC50Q8IVM0 306 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC155Q8N6L0 562 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SYT2Q8N9I0 419 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC63Q8NA47 563 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM89AQ96GI7 184 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 HGH1Q9BTY7 390 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TAOK3Q9H2K8 898 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CD93Q9NPY3 652 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 HMG20BQ9P0W2 317 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 STAP2Q9UGK3 403 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 BAIAP2L1Q9UHR4 511 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 AGO2Q9UKV8 859 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 KCNJ14Q9UNX9 436 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ATF5Q9Y2D1 282 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 NUMBLQ9Y6R0 609 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 GOLGA4Q13439 2230 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 LOC102724428A0A0B4J2F2 783 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 AKR1B15C9JRZ8 316 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 M0QX08 132 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 ERCC5P28715 1186 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 SIK1P57059 783 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TBX4P57082 545 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 C1QTNF8P60827 252 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MRPS25P82663 173 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CKAP4Q07065 602 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 COX10Q12887 443 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PSMD6Q15008 389 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 UAP1Q16222 522 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 DCAF17Q5H9S7 520 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 RNF220Q5VTB9 566 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TATDN1Q6P1N9 297 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MAEAQ7L5Y9 396 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 GSTA5Q7RTV2 222 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 RAVER1Q8IY67 606 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 SPICE1Q8N0Z3 855 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NOA1Q8NC60 698 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 JAKMIP2Q96AA8 810 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TSGA13Q96PP4 275 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 IWS1Q96ST2 819 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 SEC62Q99442 399 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 SH3GL1Q99961 368 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NDST4Q9H3R1 872 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 RTCBQ9Y3I0 505 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 IKBKGQ9Y6K9 419 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NEDD4P46934 1319 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 KDM6AO15550 1401 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 LRRC72A6NJI9 287 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TRAF5O00463 557 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 WDR46O15213 610 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 SPTLC1O15269 473 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 FOXP2O15409 715 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TEX28O15482 410 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 ZNF202O95125 648 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC159P0C7I6 412 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CALM1P0DP23 149 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CALM2P0DP24 149 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CALM3P0DP25 149 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 INPP5BP32019 993 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 SLC8A1P32418 973 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 HAAOP46952 286 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NUBP1P53384 320 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NAPAP54920 295 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 UBXN2AP68543 259 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 LETM2Q2VYF4 491 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 ADAT2Q7Z6V5 191 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CNBD1Q8NA66 436 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MSANTD4Q8NCY6 345 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 LRRC45Q96CN5 670 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NDNQ99608 321 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM129AQ9BZQ8 928 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 BLZF1Q9H2G9 400 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NLRC4Q9NPP4 1024 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PPANQ9NQ55 473 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CASS4Q9NQ75 786 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PRR12Q9ULL5 1215 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PDE4DIPQ5VU43 2346 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 A0A0U1RQJ8 604 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 HIP1RO75146 1068 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 RBP3P10745 1247 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CTRB1P17538 263 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 GUCY2FP51841 1108 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PRKCEQ02156 737 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CETN1Q12798 172 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PROSER3Q2NL68 480 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NBPF14Q5TI25 921 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 SYDE2Q5VT97 1194 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms