RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 PCDHA2Q9Y5H9 948 aa20.34■□□□□ 0.85
DDR1-252ENST00000504152 MBLAC1A4D2B0 266 aaPredicted RBP20.33■□□□□ 0.85
DDR1-252ENST00000504152 PP2D1A8MPX8 630 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 SLC26A4O43511 780 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 RPLP2P05387 115 aaKnown RBP20.33■□□□□ 0.85
DDR1-252ENST00000504152 RAG1P15918 1043 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 MTERF2Q49AM1 385 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 XKR9Q5GH70 373 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 TAF2Q6P1X5 1199 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 CABP7Q86V35 215 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 KCTD17Q8N5Z5 321 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 CEP170P1Q96L14 293 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 SCAND2PQ9GZW5 306 aaPredicted RBP20.33■□□□□ 0.85
DDR1-252ENST00000504152 CSRNP2Q9H175 543 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 HIPK3Q9H422 1215 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 TBX21Q9UL17 535 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 KIAA1024Q9UPX6 916 aa20.33■□□□□ 0.85
DDR1-252ENST00000504152 TRIM43BA6NCK2 446 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 ZBTB42B2RXF5 422 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 ZBTB39O15060 712 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 TIMP1P01033 207 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 GRIN1Q05586 938 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 TBC1D8BQ0IIM8 1120 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 TARBP2Q15633 366 aaKnown RBP20.32■□□□□ 0.84
DDR1-252ENST00000504152 ZRSR1Q15695 479 aaKnown RBP20.32■□□□□ 0.84
DDR1-252ENST00000504152 RSPH3Q86UC2 560 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 CAGE1Q8TC20 777 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 PIGOQ8TEQ8 1089 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 TRIM43Q96BQ3 446 aaPredicted RBP20.32■□□□□ 0.84
DDR1-252ENST00000504152 CALML4Q96GE6 196 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 CDK5RAP3Q96JB5 506 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
DDR1-252ENST00000504152 CLIC6Q96NY7 704 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 CTAGE1Q96RT6 745 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 JPH2Q9BR39 696 aaPredicted RBP20.32■□□□□ 0.84
DDR1-252ENST00000504152 MMTAG2Q9BU76 263 aaKnown RBP20.32■□□□□ 0.84
DDR1-252ENST00000504152 NT5C3AQ9H0P0 336 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 CYP26B1Q9NR63 512 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
DDR1-252ENST00000504152 KDM3AQ9Y4C1 1321 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 SMIM35A0A1B0GVV1 85 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 TMEM150BA6NC51 233 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 CUTAO60888 179 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 SYN1P17600 705 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 TMOD1P28289 359 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 ME1P48163 572 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 NPEPPSP55786 919 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 NME8Q8N427 588 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 METTL13Q8N6R0 699 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 ZNF579Q8NAF0 562 aaKnown RBP20.31■□□□□ 0.84
DDR1-252ENST00000504152 SPATA32Q96LK8 384 aa20.31■□□□□ 0.84
DDR1-252ENST00000504152 NOC4LQ9BVI4 516 aaKnown RBP20.31■□□□□ 0.84
DDR1-252ENST00000504152 DDX19AQ9NUU7 478 aaKnown RBP20.31■□□□□ 0.84
DDR1-252ENST00000504152 DBR1Q9UK59 544 aaKnown RBP20.31■□□□□ 0.84
DDR1-252ENST00000504152 ZMYND8Q9ULU4 1186 aaPredicted RBP20.31■□□□□ 0.84
DDR1-252ENST00000504152 A0A087WWV3 80 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 PITPNM1O00562 1244 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 MAFO75444 373 aaPredicted RBP20.3■□□□□ 0.84
DDR1-252ENST00000504152 TXLNAP40222 546 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 THPOP40225 353 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 DNM2P50570 870 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 ECM1Q16610 540 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 SPECC1Q5M775 1068 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 PLA2G4FQ68DD2 849 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 EFCAB12Q6NXP0 572 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 POTEGQ6S5H5 508 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 RPAINQ86UA6 219 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 DNAJB3Q8WWF6 145 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 LBHD1Q9BQE6 289 aaPredicted RBP20.3■□□□□ 0.84
DDR1-252ENST00000504152 SH2D3AQ9BRG2 576 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 PPP1R12CQ9BZL4 782 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 CCSER1Q9C0I3 900 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 CCDC39Q9UFE4 941 aa20.3■□□□□ 0.84
DDR1-252ENST00000504152 CAND2O75155 1236 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 C22orf31O95567 290 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 CKBP12277 381 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 RFC5P40937 340 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 HYIQ5T013 277 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 RUFY4Q6ZNE9 571 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 LEO1Q8WVC0 666 aaPredicted RBP20.29■□□□□ 0.84
DDR1-252ENST00000504152 SLC7A3Q8WY07 619 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 DHX38Q92620 1227 aaKnown RBP20.29■□□□□ 0.84
DDR1-252ENST00000504152 ZBTB10Q96DT7 871 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 EPSTI1Q96J88 318 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 CEP89Q96ST8 783 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 SUGCTQ9HAC7 445 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 PCDHA7Q9UN72 937 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 TCHHQ07283 1943 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 EVPLQ92817 2033 aa20.29■□□□□ 0.84
DDR1-252ENST00000504152 CYP2C18P33260 490 aa20.28■□□□□ 0.84
DDR1-252ENST00000504152 RARRES1P49788 294 aa20.28■□□□□ 0.84
DDR1-252ENST00000504152 POLGP54098 1239 aaPredicted RBP20.28■□□□□ 0.84
DDR1-252ENST00000504152 RBL2Q08999 1139 aa20.28■□□□□ 0.84
DDR1-252ENST00000504152 TRIM71Q2Q1W2 868 aaKnown RBP20.28■□□□□ 0.84
DDR1-252ENST00000504152 IER5Q5VY09 327 aa20.28■□□□□ 0.84
DDR1-252ENST00000504152 MFSD5Q6N075 450 aa20.28■□□□□ 0.84
DDR1-252ENST00000504152 TMEM199Q8N511 208 aa20.28■□□□□ 0.84
DDR1-252ENST00000504152 PLIN2Q99541 437 aa20.28■□□□□ 0.84
DDR1-252ENST00000504152 FAM49AQ9H0Q0 323 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms