RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 TRIM48Q8IWZ4 208 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.27□□□□□ -1.41
UBE3D-205ENST00000503942 CHAMP1Q96JM3 812 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 MAGEB10Q96LZ2 347 aaPredicted RBP6.27□□□□□ -1.41
UBE3D-205ENST00000503942 TARS2Q9BW92 718 aaKnown RBP6.27□□□□□ -1.41
UBE3D-205ENST00000503942 PPARGC1AQ9UBK2 798 aaKnown RBP6.27□□□□□ -1.41
UBE3D-205ENST00000503942 A0A087X1B8 175 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 ARVCFO00192 962 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 FBXO21O94952 628 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 ACO1P21399 889 aaKnown RBP6.26□□□□□ -1.41
UBE3D-205ENST00000503942 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 TAF7LQ5H9L4 462 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 ABHD17CQ6PCB6 329 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 Q6ZSN1 163 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 KCND1Q9NSA2 647 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 ZFP69BQ9UJL9 534 aa6.26□□□□□ -1.41
UBE3D-205ENST00000503942 KRIT1O00522 736 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 ASLP04424 464 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 STAT3P40763 770 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 USP10Q14694 798 aaKnown RBP6.25□□□□□ -1.41
UBE3D-205ENST00000503942 PTPROQ16827 1216 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 SKIDA1Q1XH10 827 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 ZNF568Q3ZCX4 644 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 CNNM4Q6P4Q7 775 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 KRT26Q7Z3Y9 468 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 RNF180Q86T96 592 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
UBE3D-205ENST00000503942 PCDH19Q8TAB3 1148 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 CACTINQ8WUQ7 758 aaKnown RBP6.25□□□□□ -1.41
UBE3D-205ENST00000503942 NEU4Q8WWR8 484 aaPredicted RBP6.25□□□□□ -1.41
UBE3D-205ENST00000503942 TMX1Q9H3N1 280 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 PTPN22Q9Y2R2 807 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 SLC30A1Q9Y6M5 507 aa6.25□□□□□ -1.41
UBE3D-205ENST00000503942 OPA1O60313 960 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 PDE8AO60658 829 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 CKMP06732 381 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 C1SP09871 688 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 ZNF888P0CJ79 500 aaPredicted RBP6.24□□□□□ -1.41
UBE3D-205ENST00000503942 NCLP19338 710 aaKnown RBP6.24□□□□□ -1.41
UBE3D-205ENST00000503942 POU3F3P20264 500 aaPredicted RBP6.24□□□□□ -1.41
UBE3D-205ENST00000503942 POU3F2P20265 443 aaPredicted RBP6.24□□□□□ -1.41
UBE3D-205ENST00000503942 IGFALSP35858 605 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 RAC3P60763 192 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 KIZQ2M2Z5 673 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 POLNQ7Z5Q5 900 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 LDLRAD3Q86YD5 345 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 STPG3Q8N7X2 389 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 FAM126AQ9BYI3 521 aaPredicted RBP6.24□□□□□ -1.41
UBE3D-205ENST00000503942 MTFR1LQ9H019 292 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 WDR26Q9H7D7 661 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 IPPKQ9H8X2 491 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 OAZ3Q9UMX2 235 aa6.24□□□□□ -1.41
UBE3D-205ENST00000503942 WNT9AO14904 365 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 SOD2P04179 222 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 NAT1P18440 290 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 AMPD3Q01432 767 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 PAK1Q13153 545 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 PCBP1Q15365 356 aaKnown RBP eCLIP6.23□□□□□ -1.41
UBE3D-205ENST00000503942 C1orf210Q8IVY1 113 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 UBR7Q8N806 425 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 IL17DQ8TAD2 202 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 CLEC4DQ8WXI8 215 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 PUS7Q96PZ0 661 aaKnown RBP6.23□□□□□ -1.41
UBE3D-205ENST00000503942 SLC6A20Q9NP91 592 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 PCDH12Q9NPG4 1184 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 ARHGAP20Q9P2F6 1191 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 COL4A3BPQ9Y5P4 624 aa6.23□□□□□ -1.41
UBE3D-205ENST00000503942 H0Y858 1186 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 SLC27A2O14975 620 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 JMJD7P0C870 316 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 SRGAP2CP0DJJ0 459 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 ACRV1P26436 265 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 GLRBP48167 497 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 GRIN1Q05586 938 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 ZCCHC8Q6NZY4 707 aaKnown RBP6.22□□□□□ -1.41
UBE3D-205ENST00000503942 MAMDC4Q6UXC1 1216 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 DNAJC10Q8IXB1 793 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 PIP4K2CQ8TBX8 421 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 FAM89AQ96GI7 184 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 ALG1Q9BT22 464 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 JAM3Q9BX67 310 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 CARD11Q9BXL7 1154 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 BRINP2Q9C0B6 783 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 PDGFDQ9GZP0 370 aaPredicted RBP6.22□□□□□ -1.41
UBE3D-205ENST00000503942 CAAP1Q9H8G2 361 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 MAPRE3Q9UPY8 281 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 COQ6Q9Y2Z9 468 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 TNFRSF18Q9Y5U5 241 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 PCSK5Q92824 1860 aa6.22□□□□□ -1.41
UBE3D-205ENST00000503942 PPFIA2O75334 1257 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 FAHP16930 419 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 CR2P20023 1033 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 GRK2P25098 689 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 GRK3P35626 688 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 DUSP8Q13202 625 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.42
UBE3D-205ENST00000503942 FNDC7Q5VTL7 733 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 CD276Q5ZPR3 534 aa6.21□□□□□ -1.42
UBE3D-205ENST00000503942 CDCA2Q69YH5 1023 aaPredicted RBP6.21□□□□□ -1.42
UBE3D-205ENST00000503942 ZC3H7AQ8IWR0 971 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms