RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PJA1Q8NG27 643 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 TTC17Q96AE7 1141 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 FOXRED1Q96CU9 486 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 RAX2Q96IS3 184 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 TUBGCP5Q96RT8 1024 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 WNT8AQ9H1J5 351 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 MAN1C1Q9NR34 630 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 DDX20Q9UHI6 824 aaKnown RBP6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 USP25Q9UHP3 1055 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 EDARQ9UNE0 448 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 PPP2R3BQ9Y5P8 575 aa6.79□□□□□ -1.32
HMGB1P3-201ENST00000502802 PRSS38A1L453 326 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 GOLGA6L22H0YM25 854 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 ELL2O00472 640 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 SRGAP3O43295 1099 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 AP1G1O43747 822 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 CTNND1O60716 968 aaKnown RBP6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 GDF11O95390 407 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 EFEMP2O95967 443 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 HPXP02790 462 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 PRNPP04156 253 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 OSMP13725 252 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 PNLIPP16233 465 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 ARL4AP40617 200 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 PITRM1Q5JRX3 1037 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 ZBTB41Q5SVQ8 909 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 CCDC62Q6P9F0 684 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 RTN4RL1Q86UN2 441 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 NLRX1Q86UT6 975 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 CILP2Q8IUL8 1156 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 SIRT2Q8IXJ6 389 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 LILRA2Q8N149 483 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 ARRDC4Q8NCT1 418 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 HIPK4Q8NE63 616 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 FERMT2Q96AC1 680 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 PEX11GQ96HA9 241 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 MAML3Q96JK9 1138 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 SLC12A5Q9H2X9 1139 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 POFUT1Q9H488 388 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 PRDM7Q9NQW5 492 aa6.78□□□□□ -1.32
HMGB1P3-201ENST00000502802 NDUFS2O75306 463 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 PRPF6O94906 941 aaKnown RBP6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 ZBTB7AO95365 584 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 LDHAP00338 332 aaKnown RBP6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 POU2F2P09086 479 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 DBHP09172 617 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 PHKG2P15735 406 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 FAHP16930 419 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 SLC5A3P53794 718 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 PICALMQ13492 652 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 SNX17Q15036 470 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 SAFBQ15424 915 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 VPS72Q15906 364 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 COBLL1Q53SF7 1204 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 SLC23A3Q6PIS1 610 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 AUTS2Q8WXX7 1259 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 SLC2A13Q96QE2 648 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 TAAR9Q96RI9 348 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 MYL10Q9BUA6 226 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 RNF38Q9H0F5 515 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 RXFP1Q9HBX9 757 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 GPR160Q9UJ42 338 aa6.77□□□□□ -1.33
HMGB1P3-201ENST00000502802 ANO9A1A5B4 782 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 ZC3H12DA2A288 527 aaKnown RBP6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 PRAMEF22A3QJZ6 481 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 COBLO75128 1261 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 APOL3O95236 402 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 CYBBP04839 570 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 LPLP06858 475 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 AOAHP28039 575 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 ERVFC1P60507 584 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 KIF23Q02241 960 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 ZNF267Q14586 743 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 LONRF3Q496Y0 759 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 TIGD5Q53EQ6 642 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 ATAT1Q5SQI0 421 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 PRAMEF18Q5VWM3 479 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 IL31Q6EBC2 164 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 PAQR3Q6TCH7 311 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 TMEM151AQ8N4L1 468 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 HPS3Q969F9 1004 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 C19orf44Q9H6X5 657 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 TNFRSF12AQ9NP84 129 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 TUBD1Q9UJT1 453 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 NUMBLQ9Y6R0 609 aa6.76□□□□□ -1.33
HMGB1P3-201ENST00000502802 ST20-MTHFSA0A0A6YYL1 179 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 F8W031 263 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 PRLP01236 227 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 PROCP04070 461 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 IFIT2P09913 472 aaKnown RBP6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 FUT4P22083 530 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 GDNFP39905 211 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 NEK3P51956 506 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 DBPQ10586 325 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 GALEQ14376 348 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 MUM1Q2TAK8 710 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 PRAMEF9Q5VWM5 478 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 CYB5RLQ6IPT4 315 aa6.75□□□□□ -1.33
HMGB1P3-201ENST00000502802 KIAA1841Q6NSI8 718 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms