RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 TBKBP1A7MCY6 615 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 ATG7O95352 703 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 CALM1P0DP23 149 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 CALM2P0DP24 149 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 CALM3P0DP25 149 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 LIFRP42702 1097 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 TCF15Q12870 199 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 KIAA0319LQ8IZA0 1049 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 FANCBQ8NB91 859 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 ATP8B4Q8TF62 1192 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 ADAM2Q99965 735 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 TLR9Q9NR96 1032 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 TYW1Q9NV66 732 aaKnown RBP16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 CFAP54Q96N23 3096 aa16.73■□□□□ 0.27
SEC61A1-207ENST00000498837 PLXNA3P51805 1871 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 C9IYK1 514 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 DDX39AO00148 427 aaKnown RBP16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 RPS6KA5O75582 802 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 FGF18O76093 207 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 PTPN5P54829 565 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 UBE3AQ05086 875 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 DUSP6Q16828 381 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 WWC2Q6AWC2 1192 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 TYW1BQ6NUM6 668 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 SUGP1Q8IWZ8 645 aaKnown RBP16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 FBXL6Q8N531 539 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 COLGALT1Q8NBJ5 622 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 SUSD6Q92537 303 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 PPP1R16BQ96T49 567 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 AGO4Q9HCK5 861 aaKnown RBP16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 RGS18Q9NS28 235 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 TMEM260Q9NX78 707 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 ST3GAL5Q9UNP4 418 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 SPTBN4Q9H254 2564 aa16.72■□□□□ 0.27
SEC61A1-207ENST00000498837 IGKV6D-21A0A0A0MT36 114 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 DENND3A2RUS2 1198 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 HBP1O60381 514 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 CCNE2O96020 404 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 ATF7P17544 494 aaPredicted RBP16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 SIGLEC14Q08ET2 396 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 CEP55Q53EZ4 464 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 ABHD15Q6UXT9 468 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 MICU3Q86XE3 530 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 ANO3Q9BYT9 981 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 CWH43Q9H720 699 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 RIC8AQ9NPQ8 531 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 AAASQ9NRG9 546 aa16.71■□□□□ 0.27
SEC61A1-207ENST00000498837 ZBTB42B2RXF5 422 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 MEIS1O00470 390 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 FSCN2O14926 492 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 SLC27A2O14975 620 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 FGFR1P11362 822 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 SLC26A2P50443 739 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 NAPAP54920 295 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 VCPP55072 806 aaKnown RBP16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 KCNC3Q14003 757 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 PKN1Q16512 942 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 CCDC60Q8IWA6 550 aaPredicted RBP16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 ASIC4Q96FT7 647 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 NEK1Q96PY6 1258 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 APOL5Q9BWW9 433 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 LSG1Q9H089 658 aaKnown RBP16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 S1PR5Q9H228 398 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 C1orf112Q9NSG2 853 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM86C1Q9NVL1 165 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 PTPRZ1P23471 2315 aaPredicted RBP16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
SEC61A1-207ENST00000498837 BACH1O14867 736 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 FOSP01100 380 aaPredicted RBP16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 ATP4AP20648 1035 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM189BP81408 668 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 KIZQ2M2Z5 673 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 PLPP4Q5VZY2 271 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM160B1Q5W0V3 765 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM228AQ86W67 206 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 CDCA3Q99618 268 aaPredicted RBP16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 OSMRQ99650 979 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 PRRX2Q99811 253 aa16.69■□□□□ 0.26
SEC61A1-207ENST00000498837 COL1A2P08123 1366 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 GPR182O15218 404 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 DHX15O43143 795 aaKnown RBP16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 SP100P23497 879 aaPredicted RBP16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 ZNF76P36508 570 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 TECP42680 631 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 ADCY7P51828 1080 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 ZNF484Q5JVG2 852 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 CREB3L3Q68CJ9 461 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 PDE12Q6L8Q7 609 aaKnown RBP16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 SWSAP1Q6NVH7 229 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 ANKRD54Q6NXT1 300 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 LLGL2Q6P1M3 1020 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 PDXDC2PQ6P474 469 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 SYCE2Q6PIF2 218 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 TMEM184AQ6ZMB5 413 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 LRRC55Q6ZSA7 311 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms