RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 PBX1P40424 430 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 EIF6P56537 245 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 EXOSC10Q01780 885 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 RC3H1Q5TC82 1133 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MICALCLQ6ZW33 695 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZNF804AQ7Z570 1209 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CAGE1Q8TC20 777 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MAIP1Q8WWC4 291 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ESR2Q92731 530 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ERLEC1Q96DZ1 483 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 DNAJC1Q96KC8 554 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 PANX2Q96RD6 677 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MXD3Q9BW11 206 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 KRT23Q9C075 422 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 RNF41Q9H4P4 317 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ACTR5Q9H9F9 607 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 RBM12Q9NTZ6 932 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 SPATA7Q9P0W8 599 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC12A4Q9UP95 1085 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 BAZ2BQ9UIF8 2168 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZMYM6O95789 1325 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 TOGARAM1Q9Y4F4 1720 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 BOLA2-SMG1P6H3BVE0 249 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 UBOX5O94941 541 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 RARAP10276 462 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 VAMP1P23763 118 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 VARSP26640 1264 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CHRNA5P30532 468 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 GUCY2DQ02846 1103 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 GRAPQ13588 217 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 UAP1Q16222 522 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MFSD14BQ5SR56 506 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MAATS1Q7Z4T9 603 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 DDX42Q86XP3 938 aaKnown RBP eCLIP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MB21D2Q8IYB1 491 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZNF444Q8N0Y2 327 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 GRAPLQ8TC17 118 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 UTP4Q969X6 686 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CAPN6Q9Y6Q1 641 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CRYBG1Q9Y4K1 1723 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ITGB4P16144 1822 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 DOT1LQ8TEK3 1739 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 A0A1B0GTH6 734 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 TMEM221A6NGB7 291 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 H0Y3Z8 333 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 FOXP2O15409 715 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ALADP13716 330 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 SYKP43405 635 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 NCALDP61601 193 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 POU5F1Q01860 360 aaKnown RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 CERKLQ49MI3 558 aaPredicted RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 APOA5Q6Q788 366 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC44A5Q8NCS7 719 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP33Q8TEY7 942 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 DHRS1Q96LJ7 313 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 CEP63Q96MT8 703 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 NELL2Q99435 816 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 NEUROG2Q9H2A3 272 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZWILCHQ9H900 591 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 DBNDD1Q9H9R9 158 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 JADE2Q9NQC1 790 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 CUEDC1Q9NWM3 386 aaPredicted RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 TUBGCP4Q9UGJ1 667 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 TMEM98Q9Y2Y6 226 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 HEY1Q9Y5J3 304 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 USH1CQ9Y6N9 552 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 NRAPQ86VF7 1730 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 RASSF10A6NK89 507 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 FOXO6A8MYZ6 492 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 PES1O00541 588 aaKnown RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 GNAT2P19087 354 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 PTGER2P43116 358 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 KLK7P49862 253 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 DHX9Q08211 1270 aaKnown RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 GRIK5Q16478 980 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 KBTBD12Q3ZCT8 623 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 CATIPQ7Z7H3 387 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 PGBD3Q8N328 593 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 EHBP1Q8NDI1 1231 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZFAND2BQ8WV99 257 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 KIFAP3Q92845 792 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZNF274Q96GC6 653 aaPredicted RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ATP6V1G3Q96LB4 118 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 MLXIPQ9HAP2 919 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ABHD10Q9NUJ1 306 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 SALL4Q9UJQ4 1053 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 PLAAQ9Y263 795 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 TDRKHQ9Y2W6 561 aaKnown RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 TNKSO95271 1327 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 STXBP3O00186 592 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 HSF2BPO75031 334 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 BAG3O95817 575 aa6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 PLEKP08567 350 aaPredicted RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 ALOX15P16050 662 aaPredicted RBP6.28□□□□□ -1.4
SOX2-OT-218ENST00000498731 CLCN2P51788 898 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms