RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 POLR2DO15514 142 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 SHOX2O60902 331 aaPredicted RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 B3GALT4O96024 378 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 THBS1P07996 1170 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 PCP11498 1178 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 NOP2P46087 812 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 TRAPPC10P48553 1259 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 MASP1P48740 699 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 USP14P54578 494 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 ATP2C1P98194 919 aaPredicted RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 GPS2Q13227 327 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 MTF1Q14872 753 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 R3HDM1Q15032 1099 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 TCEA2Q15560 299 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 PPP2R5EQ16537 467 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 TKFCQ3LXA3 575 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 TMEM67Q5HYA8 995 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 CNGA4Q8IV77 575 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 FANCBQ8NB91 859 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 GBP3Q9H0R5 595 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 ZCCHC17Q9NP64 241 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 PCDHB14Q9Y5E9 798 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 NUP98P52948 1817 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 CACNA1SQ13698 1873 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 XDHP47989 1333 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 COL1A1P02452 1464 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 DICER1Q9UPY3 1922 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 A0A0U1RQJ8 604 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ANKRD18BA2A2Z9 1011 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 RASSF10A6NK89 507 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 RNF225M0QZC1 329 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 PDE8AO60658 829 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 SYF2O95926 243 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 IVLP07476 585 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 PDGFRBP09619 1106 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 SLC5A1P13866 664 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 PRLRP16471 622 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ITGA6P23229 1130 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 FXR1P51114 621 aaKnown RBP eCLIP4.37□□□□□ -1.713e-7■■□□□ 11.8
CLTC-209ENST00000498711 GPLD1P80108 840 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ATP11AP98196 1134 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 SPAG1Q07617 926 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 TRIM29Q14134 588 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 KCNB1Q14721 858 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 TRIM67Q6ZTA4 783 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 RAB44Q7Z6P3 723 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 SRLQ86TD4 932 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 IRF2BP1Q8IU81 584 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 SULF2Q8IWU5 870 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 IGSF22Q8N9C0 903 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ST13P5Q8NFI4 369 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 ATRIPQ8WXE1 791 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 BSNDQ8WZ55 320 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ANKS1AQ92625 1134 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ZNF669Q96BR6 464 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 RPGRIP1Q96KN7 1286 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 SLC30A3Q99726 388 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 SLC26A6Q9BXS9 759 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 TTYH3Q9C0H2 523 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 MED4Q9NPJ6 270 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ABHD10Q9NUJ1 306 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 G3BP2Q9UN86 482 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 SLC12A7Q9Y666 1083 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 PTCH2Q9Y6C5 1203 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 KAT6BQ8WYB5 2073 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ZNF804BA4D1E1 1349 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 EP400Q96L91 3159 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 GRIN3BO60391 1043 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 PPFIA3O75145 1194 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 DDAH1O94760 285 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 LCA5LO95447 670 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 VIL1P09327 827 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 BMP1P13497 986 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 TNFRSF8P28908 595 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 HOXA7P31268 230 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 HNRNPH3P31942 346 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 PHKA1P46020 1223 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 COPB1P53618 953 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 RPL6Q02878 288 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 UBAP2LQ14157 1087 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 KRT31Q15323 416 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 PUM3Q15397 648 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 SAFBQ15424 915 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLTC-209ENST00000498711 IL17AQ16552 155 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ZSCAN26Q16670 478 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.37□□□□□ -1.712e-6■■■■□ 26.1
CLTC-209ENST00000498711 FIGNQ5HY92 759 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 EARS2Q5JPH6 523 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 ARL6IP4Q66PJ3 421 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 FOXR2Q6PJQ5 311 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 CYP26C1Q6V0L0 522 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 RIPOR1Q6ZS17 1223 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 USP49Q70CQ1 688 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 SLC35F6Q8N357 371 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 GAL3ST3Q96A11 431 aa4.37□□□□□ -1.71
CLTC-209ENST00000498711 NAPGQ99747 312 aaPredicted RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 NUCKS1Q9H1E3 243 aaKnown RBP4.37□□□□□ -1.71
CLTC-209ENST00000498711 GREM2Q9H772 168 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms