RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 CCT2P78371 535 aaKnown RBP12.52□□□□□ -0.41
LSAMP-206ENST00000498645 CLUL1Q15846 466 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 ZNF484Q5JVG2 852 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 METTL13Q8N6R0 699 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 CCDC148Q8NFR7 591 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 KCNB2Q92953 911 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 CLP1Q92989 425 aaKnown RBP12.52□□□□□ -0.41
LSAMP-206ENST00000498645 PABPC5Q96DU9 382 aaKnown RBP12.52□□□□□ -0.41
LSAMP-206ENST00000498645 TMX1Q9H3N1 280 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 SQORQ9Y6N5 450 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 COL1A2P08123 1366 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 NID2Q14112 1375 aa12.52□□□□□ -0.41
LSAMP-206ENST00000498645 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
LSAMP-206ENST00000498645 PLXNA4Q9HCM2 1894 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 DENND3A2RUS2 1198 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 GRXCR2A6NFK2 248 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 RPS6KA5O75582 802 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 REC8O95072 547 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 VTNP04004 478 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 PSAPP07602 524 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 PSMA5P28066 241 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 GTF2F1P35269 517 aaKnown RBP eCLIP12.51□□□□□ -0.41
LSAMP-206ENST00000498645 SPOUT1Q5T280 376 aaKnown RBP12.51□□□□□ -0.41
LSAMP-206ENST00000498645 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 FAM178BQ8IXR5 827 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 CMTR2Q8IYT2 770 aaKnown RBP12.51□□□□□ -0.41
LSAMP-206ENST00000498645 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 GJD3Q8N144 294 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 BICD2Q8TD16 824 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 NEK9Q8TD19 979 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 TMEM40Q8WWA1 233 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 OSMRQ99650 979 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 LMAN2LQ9H0V9 348 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 GABBR1Q9UBS5 961 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 NOC2LQ9Y3T9 749 aaKnown RBP12.51□□□□□ -0.41
LSAMP-206ENST00000498645 KDM3AQ9Y4C1 1321 aa12.51□□□□□ -0.41
LSAMP-206ENST00000498645 CHMP2AO43633 222 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 MGEA5O60502 916 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 C22orf31O95567 290 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 MMP1P03956 469 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 ATP4AP20648 1035 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 HYAL1Q12794 435 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 KIZQ2M2Z5 673 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 PUS10Q3MIT2 529 aaKnown RBP12.5□□□□□ -0.41
LSAMP-206ENST00000498645 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 ZNF746Q6NUN9 644 aaPredicted RBP12.5□□□□□ -0.41
LSAMP-206ENST00000498645 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
LSAMP-206ENST00000498645 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
LSAMP-206ENST00000498645 ADAM2Q99965 735 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
LSAMP-206ENST00000498645 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 PLVAPQ9BX97 442 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 RNF26Q9BY78 433 aaPredicted RBP12.5□□□□□ -0.41
LSAMP-206ENST00000498645 ERVK-5Q9HDB9 667 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 ST3GAL5Q9UNP4 418 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 PLAGL2Q9UPG8 496 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 PCDHB7Q9Y5E2 793 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 PCDHA10Q9Y5I2 948 aa12.5□□□□□ -0.41
LSAMP-206ENST00000498645 MAFBQ9Y5Q3 323 aaPredicted RBP12.5□□□□□ -0.41
LSAMP-206ENST00000498645 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 ITGB1P05556 798 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 IFNAR1P17181 557 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 DNAJB1P25685 340 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 PDIA3P30101 505 aaKnown RBP12.49□□□□□ -0.41
LSAMP-206ENST00000498645 SARSP49591 514 aaKnown RBP12.49□□□□□ -0.41
LSAMP-206ENST00000498645 CLCN3P51790 818 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 NLRP5P59047 1200 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 NTRK3Q16288 839 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 TRIM22Q8IYM9 498 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 CRIPAKQ8N1N5 446 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 KLHL23Q8NBE8 558 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 GJA10Q969M2 543 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 AKT3Q9Y243 479 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 FAM50BQ9Y247 325 aa12.49□□□□□ -0.41
LSAMP-206ENST00000498645 WDR64B1ANS9 1081 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 CPLX1O14810 134 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 GPR182O15218 404 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 MSH4O15457 936 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 LINC01565O15544 149 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 NCK2O43639 380 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 GAS7O60861 476 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 CIITAP33076 1130 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 LTBRP36941 435 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 CRYBB1P53674 252 aaPredicted RBP12.48□□□□□ -0.41
LSAMP-206ENST00000498645 PRKCEQ02156 737 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 DLX2Q07687 328 aaPredicted RBP12.48□□□□□ -0.41
LSAMP-206ENST00000498645 STK3Q13188 491 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 ODR4Q5SWX8 454 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 RUFY3Q7L099 469 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 ADGRD2Q7Z7M1 963 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 FAM228AQ86W67 206 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 LRRC71Q8N4P6 559 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 POF1BQ8WVV4 589 aa12.48□□□□□ -0.41
LSAMP-206ENST00000498645 P2RX5Q93086 422 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms