RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PCDHB12Q9Y5F1 795 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 FGF18O76093 207 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 CALM1P0DP23 149 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 CALM2P0DP24 149 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 CALM3P0DP25 149 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 KLRC1P26715 233 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 ERVFC1P60507 584 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 UBE3AQ05086 875 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 DUSP6Q16828 381 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 WWC2Q6AWC2 1192 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 TYW1BQ6NUM6 668 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 TMTC2Q8N394 836 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 ADAM2Q99965 735 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 RGS18Q9NS28 235 aa16.78■□□□□ 0.28
TRAF4-212ENST00000498540 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 IGKV6D-21A0A0A0MT36 114 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 DENND3A2RUS2 1198 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 C9IYK1 514 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 RPS6KA5O75582 802 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 ATG7O95352 703 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 CCNE2O96020 404 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 ATF7P17544 494 aaPredicted RBP16.77■□□□□ 0.28
TRAF4-212ENST00000498540 LIFRP42702 1097 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 VCPP55072 806 aaKnown RBP16.77■□□□□ 0.28
TRAF4-212ENST00000498540 SIGLEC14Q08ET2 396 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 PKN1Q16512 942 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 CEP55Q53EZ4 464 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 THNSL1Q8IYQ7 743 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 KIAA0319LQ8IZA0 1049 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 FANCBQ8NB91 859 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 COLGALT1Q8NBJ5 622 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 ASIC4Q96FT7 647 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 PPP1R16BQ96T49 567 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 AAASQ9NRG9 546 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 TYW1Q9NV66 732 aaKnown RBP16.77■□□□□ 0.28
TRAF4-212ENST00000498540 TMEM260Q9NX78 707 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 ST3GAL5Q9UNP4 418 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
TRAF4-212ENST00000498540 DDX39AO00148 427 aaKnown RBP16.76■□□□□ 0.27
TRAF4-212ENST00000498540 FSCN2O14926 492 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 FGFR1P11362 822 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 SLC26A2P50443 739 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 KCNC3Q14003 757 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 SLC24A5Q71RS6 500 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
TRAF4-212ENST00000498540 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 CDCA3Q99618 268 aaPredicted RBP16.76■□□□□ 0.27
TRAF4-212ENST00000498540 PRRX2Q99811 253 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 ANO3Q9BYT9 981 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 CWH43Q9H720 699 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 RIC8AQ9NPQ8 531 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 C1orf112Q9NSG2 853 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 FAM86C1Q9NVL1 165 aa16.76■□□□□ 0.27
TRAF4-212ENST00000498540 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 BACH1O14867 736 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 SLC27A2O14975 620 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 HBP1O60381 514 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 NAPAP54920 295 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 PLPP4Q5VZY2 271 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 ABHD15Q6UXT9 468 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 FAM228AQ86W67 206 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 OSMRQ99650 979 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 APOL5Q9BWW9 433 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 LSG1Q9H089 658 aaKnown RBP16.75■□□□□ 0.27
TRAF4-212ENST00000498540 S1PR5Q9H228 398 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 COL1A2P08123 1366 aa16.75■□□□□ 0.27
TRAF4-212ENST00000498540 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 MEIS1O00470 390 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 SP100P23497 879 aaPredicted RBP16.74■□□□□ 0.27
TRAF4-212ENST00000498540 TECP42680 631 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 ADCY7P51828 1080 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 KIZQ2M2Z5 673 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 FAM160B1Q5W0V3 765 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 ANKRD54Q6NXT1 300 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 LLGL2Q6P1M3 1020 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 SYCE2Q6PIF2 218 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 TMEM184AQ6ZMB5 413 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 TMEM161AQ9NX61 479 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 MYH9P35579 1960 aaKnown RBP16.74■□□□□ 0.27
TRAF4-212ENST00000498540 CACNA1HO95180 2353 aa16.74■□□□□ 0.27
TRAF4-212ENST00000498540 HIDE1A8MVS5 230 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 GPR182O15218 404 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 C22orf31O95567 290 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 FOSP01100 380 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-212ENST00000498540 PDGFBP01127 241 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-212ENST00000498540 LAG3P18627 525 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 ATP4AP20648 1035 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 SREBF1P36956 1147 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 DSC3Q14574 896 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 PDE12Q6L8Q7 609 aaKnown RBP16.73■□□□□ 0.27
TRAF4-212ENST00000498540 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 PDXDC2PQ6P474 469 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
TRAF4-212ENST00000498540 SNX27Q96L92 541 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 TCF25Q9BQ70 676 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms