RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 WDR72Q3MJ13 1102 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 Q6ZUG5 572 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 C11orf74Q86VG3 221 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 IFNL2Q8IZJ0 200 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 AJUBAQ96IF1 538 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 KATNBL1Q9H079 304 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 UCKL1Q9NWZ5 548 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 ADAM29Q9UKF5 820 aa6.74□□□□□ -1.33
SSR3-209ENST00000498205 WRNQ14191 1432 aaPredicted RBP eCLIP6.74□□□□□ -1.33
SSR3-209ENST00000498205 UBA6A0AVT1 1052 aaPredicted RBP6.73□□□□□ -1.33
SSR3-209ENST00000498205 PRAMEF22A3QJZ6 481 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 FAM83GA6ND36 823 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 OTOL1A6NHN0 477 aaPredicted RBP6.73□□□□□ -1.33
SSR3-209ENST00000498205 CPEP16870 476 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
SSR3-209ENST00000498205 KPNA1P52294 538 aaPredicted RBP6.73□□□□□ -1.33
SSR3-209ENST00000498205 ROM1Q03395 351 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 DHCR24Q15392 516 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 GPR158Q5T848 1215 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 EGFLAMQ63HQ2 1017 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 FEZF2Q8TBJ5 459 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 C16orf92Q96LL3 132 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 CAAP1Q9H8G2 361 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 OXSMQ9NWU1 459 aa6.73□□□□□ -1.33
SSR3-209ENST00000498205 USP36Q9P275 1121 aaKnown RBP6.73□□□□□ -1.33
SSR3-209ENST00000498205 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 MPIG6BO95866 241 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 ATP2A2P16615 1042 aaKnown RBP6.72□□□□□ -1.33
SSR3-209ENST00000498205 HOXA5P20719 270 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 CD40P25942 277 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 MC4RP32245 332 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 STAT3P40763 770 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 LSSP48449 732 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 IL13RA1P78552 427 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 LRRC32Q14392 662 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 ZNF568Q3ZCX4 644 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 TTC38Q5R3I4 469 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 FSTL4Q6MZW2 842 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 DDX46Q7L014 1031 aaKnown RBP6.72□□□□□ -1.33
SSR3-209ENST00000498205 RTN4RL1Q86UN2 441 aaPredicted RBP6.72□□□□□ -1.33
SSR3-209ENST00000498205 PHYKPLQ8IUZ5 450 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 SMC1BQ8NDV3 1235 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 CHAC2Q8WUX2 184 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 MAML3Q96JK9 1138 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 AMNQ9BXJ7 453 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 CARD11Q9BXL7 1154 aa6.72□□□□□ -1.33
SSR3-209ENST00000498205 CNOT11Q9UKZ1 510 aaKnown RBP6.72□□□□□ -1.33
SSR3-209ENST00000498205 SMARCA2P51531 1590 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 LOC105371045A0A1W2PR82 267 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 ZEB2O60315 1214 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 PRLP01236 227 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 ETV4P43268 484 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 CTSWP56202 376 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 PHC1P78364 1004 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 TOP3AQ13472 1001 aaPredicted RBP6.71□□□□□ -1.34
SSR3-209ENST00000498205 USP10Q14694 798 aaKnown RBP6.71□□□□□ -1.34
SSR3-209ENST00000498205 NFIXQ14938 502 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 PCBP1Q15365 356 aaKnown RBP eCLIP6.71□□□□□ -1.34
SSR3-209ENST00000498205 ZMAT1Q5H9K5 638 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 UBXN11Q5T124 520 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 TIGD7Q6NT04 549 aaPredicted RBP6.71□□□□□ -1.34
SSR3-209ENST00000498205 RALYLQ86SE5 291 aaKnown RBP6.71□□□□□ -1.34
SSR3-209ENST00000498205 THNSL2Q86YJ6 484 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 USP7Q93009 1102 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 FOXRED1Q96CU9 486 aaPredicted RBP6.71□□□□□ -1.34
SSR3-209ENST00000498205 MSL2Q9HCI7 577 aa6.71□□□□□ -1.34
SSR3-209ENST00000498205 A0A0G2JNJ9 132 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 DVL2O14641 736 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 SLC9A1P19634 815 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 MASP1P48740 699 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 BCAR1P56945 870 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 IL2P60568 153 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 EIF4HQ15056 248 aaKnown RBP6.7□□□□□ -1.34
SSR3-209ENST00000498205 KANK2Q63ZY3 851 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 TMEM200BQ69YZ2 307 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 GRAMD4Q6IC98 578 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 RNF180Q86T96 592 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 ZDHHC14Q8IZN3 488 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 NXPE1Q8N323 547 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 C7orf31Q8N865 590 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 NUDT10Q8NFP7 164 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 CXorf38Q8TB03 319 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 RPGRQ92834 1020 aaKnown RBP6.7□□□□□ -1.34
SSR3-209ENST00000498205 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
SSR3-209ENST00000498205 MBD6Q96DN6 1003 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 NUDT11Q96G61 164 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 ELF4Q99607 663 aaPredicted RBP6.7□□□□□ -1.34
SSR3-209ENST00000498205 ZDHHC5Q9C0B5 715 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 TOMM22Q9NS69 142 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 THG1LQ9NWX6 298 aaKnown RBP6.7□□□□□ -1.34
SSR3-209ENST00000498205 Q9UFV3 132 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 UNC13AQ9UPW8 1703 aa6.7□□□□□ -1.34
SSR3-209ENST00000498205 CADPSQ9ULU8 1353 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 ZNF891A8MT65 544 aaPredicted RBP6.69□□□□□ -1.34
SSR3-209ENST00000498205 BRINP1O60477 761 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 CANXP27824 592 aaKnown RBP6.69□□□□□ -1.34
SSR3-209ENST00000498205 LSP1P33241 339 aa6.69□□□□□ -1.34
SSR3-209ENST00000498205 SESN2P58004 480 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms