RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 BCL6P41182 706 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 SLC1A3P43003 542 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 SNRPD1P62314 119 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 DNM1Q05193 864 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 TWISTNBQ3B726 338 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 KHDC1Q4VXA5 237 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 ZNF648Q5T619 568 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 C9orf131Q5VYM1 1079 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ZCCHC12Q6PEW1 402 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ELMSAN1Q6PJG2 1045 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 FAM47EQ6ZV65 393 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ACAD11Q709F0 780 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 SPATA2LQ8IUW3 424 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 SYT12Q8IV01 421 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CCDC146Q8IYE0 955 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 RGL4Q8IZJ4 473 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 PATE1Q8WXA2 126 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 SMARCC1Q92922 1105 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 ATP2A3Q93084 1043 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 THOC1Q96FV9 657 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 CATSPERBQ9H7T0 1116 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ARMT1Q9H993 441 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CASS4Q9NQ75 786 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CHPF2Q9P2E5 772 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 PUF60Q9UHX1 559 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 PARP4Q9UKK3 1724 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 FSD2A1L4K1 749 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 TOR1BO14657 336 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 PRAMEF4O60810 478 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 LYNP07948 512 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CD63P08962 238 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ALOX5P09917 674 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 PCP11498 1178 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 NR2F2P24468 414 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CLN3Q13286 438 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 PDE3BQ13370 1112 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 TEAD4Q15561 434 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CR1LQ2VPA4 569 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CFAP100Q494V2 611 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 SLC22A6Q4U2R8 563 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 LRRC10Q5BKY1 277 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 SPECC1Q5M775 1068 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 LY6G6FQ5SQ64 297 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 OTUD7BQ6GQQ9 843 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 PTCRAQ6ISU1 281 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 CAPN12Q6ZSI9 719 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 OTUD6AQ7L8S5 288 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 WFDC8Q8IUA0 241 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 FLCNQ8NFG4 579 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 NEU4Q8WWR8 484 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 LINC00479Q96M42 142 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 GDAP1L1Q96MZ0 367 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 NIF3L1Q9GZT8 377 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ACAD9Q9H845 621 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CNOT10Q9H9A5 744 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 IPO11Q9UI26 975 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 THRAP3Q9Y2W1 955 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 SAMM50Q9Y512 469 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 USP9YO00507 2555 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 MYO5CQ9NQX4 1742 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 NPHP3Q7Z494 1330 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CLIP1P30622 1438 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ABCA7Q8IZY2 2146 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 COL18A1P39060 1754 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PALM3A6NDB9 673 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 C3orf80F5H4A9 247 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 H7C417 338 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 MED24O75448 989 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CDC123O75794 336 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 ESRRBO95718 433 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CDK1P06493 297 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TFPIP10646 304 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ARL3P36405 182 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 THOP1P52888 689 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 E2F1Q01094 437 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 HYAL2Q12891 473 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 GRIK3Q13003 919 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ITGADQ13349 1161 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SEPT6Q14141 434 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LONRF1Q17RB8 773 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TSTD2Q5T7W7 516 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LEKR1Q6ZMV7 388 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 DBX2Q6ZNG2 339 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 NUDT13Q86X67 352 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ABTB2Q8N961 1025 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 B4GALNT2Q8NHY0 566 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 DEPDC1BQ8WUY9 529 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TEKT4Q8WW24 435 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 JPH3Q8WXH2 748 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 STARD4Q96DR4 205 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 EDC3Q96F86 508 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 SEMA6BQ9H3T3 888 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 MMRN2Q9H8L6 949 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZFAND3Q9H8U3 227 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZWILCHQ9H900 591 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 FBXO6Q9NRD1 293 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 POLR3BQ9NW08 1133 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 ASAP1Q9ULH1 1129 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 FAM50BQ9Y247 325 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZKSCAN5Q9Y2L8 839 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms