RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 A0A0U1RQG5 324 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-227ENST00000498056 HAS3O00219 553 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 ZBTB39O15060 712 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 HBP1O60381 514 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 USO1O60763 962 aaKnown RBP15.13■□□□□ 0.01
CPNE1-227ENST00000498056 EYA4O95677 639 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 LIG1P18858 919 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 RARRES1P49788 294 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 NPEPPSP55786 919 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 SOX10P56693 466 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 MCM6Q14566 821 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 GRIK4Q16099 956 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 NBPF20Q3BBV1 942 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 OTUD6AQ7L8S5 288 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 CEP57L1Q8IYX8 460 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 IQUBQ8NA54 791 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 LARP4BQ92615 738 aaKnown RBP15.13■□□□□ 0.01
CPNE1-227ENST00000498056 RAD54LQ92698 747 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 CEP170P1Q96L14 293 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 NRBP2Q9NSY0 501 aa15.13■□□□□ 0.01
CPNE1-227ENST00000498056 STBD1O95210 358 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 POLGP54098 1239 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-227ENST00000498056 ITGA7Q13683 1181 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 E2F4Q16254 413 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 NAALADL2Q58DX5 795 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 SENP6Q9GZR1 1112 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-227ENST00000498056 C11orf49Q9H6J7 331 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 CYP26B1Q9NR63 512 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 ANKEF1Q9NU02 776 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 BLOC1S4Q9NUP1 217 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 HDAC6Q9UBN7 1215 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 SERTAD1Q9UHV2 236 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 TUBE1Q9UJT0 475 aa15.12■□□□□ 0.01
CPNE1-227ENST00000498056 DBR1Q9UK59 544 aaKnown RBP15.12■□□□□ 0.01
CPNE1-227ENST00000498056 FAM237AA0A1B0GTK4 181 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 C17orf102A2RUQ5 167 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 CCDC85CA6NKD9 419 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 KINO60870 393 aaKnown RBP15.11■□□□□ 0.01
CPNE1-227ENST00000498056 NR1I2O75469 434 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 PLA2G4BP0C869 781 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 INSRRP14616 1297 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 EN2P19622 333 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-227ENST00000498056 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-227ENST00000498056 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-227ENST00000498056 TBC1D8BQ0IIM8 1120 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 EMC2Q15006 297 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 GPBP1Q86WP2 473 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 FMR1NBQ8N0W7 255 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-227ENST00000498056 ZBTB10Q96DT7 871 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 PAWRQ96IZ0 340 aaKnown RBP15.11■□□□□ 0.01
CPNE1-227ENST00000498056 CUEDC2Q9H467 287 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 SETD4Q9NVD3 440 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 GTF2IRD1Q9UHL9 959 aa15.11■□□□□ 0.01
CPNE1-227ENST00000498056 SCN5AQ14524 2016 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 DNAH12Q6ZR08 3092 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 ACTN4O43707 911 aaKnown RBP15.1■□□□□ 0.01
CPNE1-227ENST00000498056 ZNF202O95125 648 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 MBD3O95983 291 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 KRT18P05783 430 aaKnown RBP15.1■□□□□ 0.01
CPNE1-227ENST00000498056 ZNF484Q5JVG2 852 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 NFRKBQ6P4R8 1299 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 PADI6Q6TGC4 694 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 GRAMD1CQ8IYS0 662 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 KCTD17Q8N5Z5 321 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 CNNM3Q8NE01 707 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 SLC7A3Q8WY07 619 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 STAMQ92783 540 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 RUSC1Q9BVN2 902 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 NIFKQ9BYG3 293 aaKnown RBP15.1■□□□□ 0.01
CPNE1-227ENST00000498056 MAGEF1Q9HAY2 307 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 ATP6V0A4Q9HBG4 840 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 DACT1Q9NYF0 836 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 NOD1Q9Y239 953 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 NRCAMQ92823 1304 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 LTBP2Q14767 1821 aa15.1■□□□□ 0.01
CPNE1-227ENST00000498056 RRN3P2A6NIE6 340 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 ZBTB42B2RXF5 422 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 C22orf31O95567 290 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 PTMSP20962 102 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 RFC5P40937 340 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 AFMP43652 599 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 SLC12A3P55017 1021 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
CPNE1-227ENST00000498056 RAD51AP2Q09MP3 1159 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 GDF6Q6KF10 455 aaPredicted RBP15.09■□□□□ 0.01
CPNE1-227ENST00000498056 KRBA2Q6ZNG9 492 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 SV2BQ7L1I2 683 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 MAEAQ7L5Y9 396 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 NECAB2Q7Z6G3 386 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 LRRC71Q8N4P6 559 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 ENGASEQ8NFI3 743 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 GPT2Q8TD30 523 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 CCDC34Q96HJ3 373 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 MTRQ99707 1265 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 TNMDQ9H2S6 317 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 USP25Q9UHP3 1055 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 GRIN2DO15399 1336 aa15.09■□□□□ 0.01
CPNE1-227ENST00000498056 ARVCFO00192 962 aa15.08■□□□□ 0
CPNE1-227ENST00000498056 PQBP1O60828 265 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms