RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CCDC39Q9UFE4 941 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 FBXO10Q9UK96 956 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 MAGED2Q9UNF1 606 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 GPR25O00155 361 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 C2CD2LO14523 706 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 FGF18O76093 207 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 LRIG2O94898 1065 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 CD3EP07766 207 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 PLS3P13797 630 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 RPS6KB1P23443 525 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 POLD1P28340 1107 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 PDIA3P30101 505 aaKnown RBP7.12□□□□□ -1.27
BRCA1-224ENST00000497488 ARL4CP56559 192 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 PTSQ03393 145 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 APOA5Q6Q788 366 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 GALNT5Q7Z7M9 940 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 DAAM2Q86T65 1068 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 COL23A1Q86Y22 540 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-224ENST00000497488 SYTL1Q8IYJ3 562 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 BRI3BPQ8WY22 251 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 APIPQ96GX9 242 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 ZC3H10Q96K80 434 aaKnown RBP7.12□□□□□ -1.27
BRCA1-224ENST00000497488 SP110Q9HB58 689 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 VPS45Q9NRW7 570 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 CLEC1BQ9P126 229 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 PPARGC1AQ9UBK2 798 aaKnown RBP7.12□□□□□ -1.27
BRCA1-224ENST00000497488 SNX13Q9Y5W8 968 aa7.12□□□□□ -1.27
BRCA1-224ENST00000497488 ERCC6Q03468 1493 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 B4E171 279 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 FOXN3O00409 490 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-224ENST00000497488 FFAR2O15552 330 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 SIGLEC6O43699 453 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 SLITRK5O94991 958 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 DDX58O95786 925 aaKnown RBP7.11□□□□□ -1.27
BRCA1-224ENST00000497488 TSHRP16473 764 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 PDE6AP16499 860 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 CD40P25942 277 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 KRT9P35527 623 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 TSPAN7P41732 249 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 IL12RB1P42701 662 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 CEBPAP49715 358 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-224ENST00000497488 KIF11P52732 1056 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 MOGSQ13724 837 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 PRKG1Q13976 671 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 TAF11Q15544 211 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 ANGEL2Q5VTE6 544 aaKnown RBP7.11□□□□□ -1.27
BRCA1-224ENST00000497488 IQCEQ6IPM2 695 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 HIBCHQ6NVY1 386 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-224ENST00000497488 ESRP1Q6NXG1 681 aaKnown RBP7.11□□□□□ -1.27
BRCA1-224ENST00000497488 HHIPL2Q6UWX4 724 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 TMTC1Q8IUR5 882 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 SIRT2Q8IXJ6 389 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 PPM1NQ8N819 430 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 PCYOX1LQ8NBM8 494 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 NUDT8Q8WV74 236 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 FERMT2Q96AC1 680 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 RETREG1Q9H6L5 497 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 UBN1Q9NPG3 1134 aa7.11□□□□□ -1.27
BRCA1-224ENST00000497488 ANKRD18BA2A2Z9 1011 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 POM121BA6NF01 834 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 FRS3O43559 492 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 MAN1A2O60476 641 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 ADAM11O75078 769 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 SKAP2O75563 359 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 RPL17P18621 184 aaKnown RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 PTX3P26022 381 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 RXRBP28702 533 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 TPP2P29144 1249 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 ETV3P41162 512 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 SLC16A1P53985 500 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 JAM2P57087 298 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 POSTNQ15063 836 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 EXOSC6Q5RKV6 272 aaKnown RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 FSTL4Q6MZW2 842 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 OSTM1Q86WC4 334 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 ZZZ3Q8IYH5 903 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 ESX1Q8N693 406 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 RIN2Q8WYP3 895 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 ZNF496Q96IT1 587 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 RSRC1Q96IZ7 334 aaKnown RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 RMDN3Q96TC7 470 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 BARD1Q99728 777 aaKnown RBP7.1□□□□□ -1.27
BRCA1-224ENST00000497488 AP1M1Q9BXS5 423 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 C22orf23Q9BZE7 217 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 MAGEH1Q9H213 219 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 PLEKHA5Q9HAU0 1116 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 WASH6PQ9NQA3 447 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 HELLSQ9NRZ9 838 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 CHST7Q9NS84 486 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 GGA3Q9NZ52 723 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 MSRAQ9UJ68 235 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 EDARQ9UNE0 448 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 STXBP5LQ9Y2K9 1186 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 PCDHA2Q9Y5H9 948 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 LAMC3Q9Y6N6 1575 aa7.1□□□□□ -1.27
BRCA1-224ENST00000497488 PRAMEF1O95521 474 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 GSNP06396 782 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 THP07101 528 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms