RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ARHGAP20Q9P2F6 1191 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 IRAK3Q9Y616 596 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 PRLP01236 227 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 KRT1P04264 644 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 ECE1P42892 770 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 GLRBP48167 497 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 ERVK-21P61565 698 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 SLC6A3Q01959 620 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 ALDH6A1Q02252 535 aaKnown RBP6.54□□□□□ -1.36
VPS36-206ENST00000497149 RTP5Q14D33 572 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 PDCD1Q15116 288 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 PLEKHG6Q3KR16 790 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 PHF19Q5T6S3 580 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 SYDE2Q5VT97 1194 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 TIGD7Q6NT04 549 aaPredicted RBP6.54□□□□□ -1.36
VPS36-206ENST00000497149 ATG14Q6ZNE5 492 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 TTLL6Q8N841 843 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 C7orf31Q8N865 590 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 ZBTB8AQ96BR9 441 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 MTMR8Q96EF0 704 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 CLIC6Q96NY7 704 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 ASPSCR1Q9BZE9 553 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 SEMA4AQ9H3S1 761 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 EPB41L4AQ9HCS5 686 aaPredicted RBP6.54□□□□□ -1.36
VPS36-206ENST00000497149 TRHDEQ9UKU6 1024 aa6.54□□□□□ -1.36
VPS36-206ENST00000497149 KDM1AO60341 852 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 IL18BPO95998 194 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
VPS36-206ENST00000497149 JAG1P78504 1218 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 HTRA3P83110 453 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 ROM1Q03395 351 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 SMAD4Q13485 552 aaKnown RBP6.53□□□□□ -1.36
VPS36-206ENST00000497149 SSPNQ14714 243 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 LRSAM1Q6UWE0 723 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 ESPNLQ6ZVH7 1005 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 FAM129CQ86XR2 697 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 CMIPQ8IY22 773 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 CALML6Q8TD86 181 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 PPP1R16BQ96T49 567 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 BTBD2Q9BX70 525 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 IRF2BPLQ9H1B7 796 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 C14orf119Q9NWQ9 140 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 KCNG1Q9UIX4 513 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 ZFP69BQ9UJL9 534 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 PMF1-BGLAPU3KQ54 211 aa6.53□□□□□ -1.36
VPS36-206ENST00000497149 ARID1BQ8NFD5 2236 aaPredicted RBP6.53□□□□□ -1.36
VPS36-206ENST00000497149 GOLGA8AA7E2F4 631 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 GOLGA8BA8MQT2 603 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 ELL2O00472 640 aaPredicted RBP6.52□□□□□ -1.37
VPS36-206ENST00000497149 GABRDO14764 452 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 PRPF6O94906 941 aaKnown RBP6.52□□□□□ -1.37
VPS36-206ENST00000497149 C1QTNF9P0C862 333 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 RGS3P49796 1198 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 SCAND1P57086 179 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 MOGSQ13724 837 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 MYBPC3Q14896 1274 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 INAVAQ3KP66 663 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 SLFN12LQ6IEE8 588 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 CNKSR3Q6P9H4 555 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 CBARPQ8N350 705 aaPredicted RBP6.52□□□□□ -1.37
VPS36-206ENST00000497149 STPG3Q8N7X2 389 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 FNIP1Q8TF40 1166 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 LMBR1Q8WVP7 490 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 ZSWIM3Q96MP5 696 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 WRNIP1Q96S55 665 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 SLC38A3Q99624 504 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 TACO1Q9BSH4 297 aaKnown RBP6.52□□□□□ -1.37
VPS36-206ENST00000497149 MYL10Q9BUA6 226 aa6.52□□□□□ -1.37
VPS36-206ENST00000497149 SMG5Q9UPR3 1016 aaKnown RBP6.52□□□□□ -1.37
VPS36-206ENST00000497149 TCAF2A6NFQ2 919 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 FBXO21O94952 628 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 APOL3O95236 402 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 C8AP07357 584 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 KLF1Q13351 362 aaPredicted RBP6.51□□□□□ -1.37
VPS36-206ENST00000497149 STILQ15468 1287 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 RGL3Q3MIN7 710 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 ZNF648Q5T619 568 aaPredicted RBP6.51□□□□□ -1.37
VPS36-206ENST00000497149 PRAMEF9Q5VWM5 478 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 DPP8Q6V1X1 898 aaPredicted RBP6.51□□□□□ -1.37
VPS36-206ENST00000497149 KANSL1Q7Z3B3 1105 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 CXorf67Q86X51 503 aaPredicted RBP6.51□□□□□ -1.37
VPS36-206ENST00000497149 BHLHE22Q8NFJ8 381 aaPredicted RBP6.51□□□□□ -1.37
VPS36-206ENST00000497149 WDR48Q8TAF3 677 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 PWWP2AQ96N64 755 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 ANO3Q9BYT9 981 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 OR10A5Q9H207 317 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 CD320Q9NPF0 282 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 KCND1Q9NSA2 647 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 SPATA6Q9NWH7 488 aaPredicted RBP6.51□□□□□ -1.37
VPS36-206ENST00000497149 CROTQ9UKG9 612 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 CNOT6Q9ULM6 557 aaKnown RBP6.51□□□□□ -1.37
VPS36-206ENST00000497149 KCTD3Q9Y597 815 aa6.51□□□□□ -1.37
VPS36-206ENST00000497149 CYP7B1O75881 506 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 PI3P19957 117 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 APEX1P27695 318 aaKnown RBP6.5□□□□□ -1.37
VPS36-206ENST00000497149 IL13RA1P78552 427 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 ADCY2Q08462 1091 aa6.5□□□□□ -1.37
VPS36-206ENST00000497149 NOLC1Q14978 699 aaKnown RBP eCLIP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms