RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 BRAPQ7Z569 592 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 CISD2Q8N5K1 135 aaKnown RBP5.01□□□□□ -1.61
VPS26A-208ENST00000497022 GIMAP8Q8ND71 665 aaPredicted RBP5.01□□□□□ -1.61
VPS26A-208ENST00000497022 CELF4Q9BZC1 486 aaKnown RBP5.01□□□□□ -1.61
VPS26A-208ENST00000497022 KATNBL1Q9H079 304 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 ARHGAP28Q9P2N2 729 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 COQ6Q9Y2Z9 468 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 TCRBV16S1A1N1A0A5B0 115 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 PRAMEF25A6NGN4 478 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 KCNA6P17658 529 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 PTGS1P23219 599 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 CSF2RBP32927 897 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 HERVK_113P62684 666 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 BMS1Q14692 1282 aaKnown RBP5□□□□□ -1.61
VPS26A-208ENST00000497022 DPP8Q6V1X1 898 aaPredicted RBP5□□□□□ -1.61
VPS26A-208ENST00000497022 OVCH1Q7RTY7 1134 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 FGD2Q7Z6J4 655 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 REXO1L1PQ8IX06 675 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 NCOA5Q9HCD5 579 aaKnown RBP5□□□□□ -1.61
VPS26A-208ENST00000497022 TRIM39Q9HCM9 518 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 BTBD7Q9P203 1132 aa5□□□□□ -1.61
VPS26A-208ENST00000497022 PLD2O14939 933 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 NPTXRO95502 500 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 AOAHP28039 575 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 POLD1P28340 1107 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 AGBL4Q5VU57 503 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 ABHD17CQ6PCB6 329 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 NOSTRINQ8IVI9 506 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 DNAJC10Q8IXB1 793 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 LRRC37BQ96QE4 947 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 INCENPQ9NQS7 918 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 GALNT8Q9NY28 637 aa4.99□□□□□ -1.61
VPS26A-208ENST00000497022 ESYT3A0FGR9 886 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 SCDO00767 359 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 RAPGEF3O95398 923 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 MC4RP32245 332 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 TOP3AQ13472 1001 aaPredicted RBP4.98□□□□□ -1.61
VPS26A-208ENST00000497022 ZNF568Q3ZCX4 644 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 FSTL4Q6MZW2 842 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 GPR155Q7Z3F1 870 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 IGSF22Q8N9C0 903 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 EXTL1Q92935 676 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 NEIL1Q96FI4 390 aaPredicted RBP4.98□□□□□ -1.61
VPS26A-208ENST00000497022 WNK4Q96J92 1243 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 DRC1Q96MC2 740 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 CLUHP3Q96NS8 147 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 TNFRSF18Q9Y5U5 241 aa4.98□□□□□ -1.61
VPS26A-208ENST00000497022 SLC12A8A0AV02 714 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 CUTAO60888 179 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 RAD17O75943 681 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 MPIG6BO95866 241 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 MMEP08473 750 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 ZNF888P0CJ79 500 aaPredicted RBP4.97□□□□□ -1.61
VPS26A-208ENST00000497022 IL13RA1P78552 427 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 SQSTM1Q13501 440 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 USP10Q14694 798 aaKnown RBP4.97□□□□□ -1.61
VPS26A-208ENST00000497022 STILQ15468 1287 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 WDR72Q3MJ13 1102 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 FNDC3BQ53EP0 1204 aaKnown RBP4.97□□□□□ -1.61
VPS26A-208ENST00000497022 TM4SF20Q53R12 229 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 TMEM177Q53S58 311 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 CXXC5Q7LFL8 322 aaKnown RBP4.97□□□□□ -1.61
VPS26A-208ENST00000497022 TAX1BP1Q86VP1 789 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 FUKQ8N0W3 1084 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 DLG3Q92796 817 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 MRFAP1L1Q96HT8 127 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 BTBD2Q9BX70 525 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 AMNQ9BXJ7 453 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 CARD11Q9BXL7 1154 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 ZSWIM4Q9H7M6 989 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 KCNH7Q9NS40 1196 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 UCKL1Q9NWZ5 548 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 PTPN22Q9Y2R2 807 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 B3GALT1Q9Y5Z6 326 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 SLC30A1Q9Y6M5 507 aa4.97□□□□□ -1.61
VPS26A-208ENST00000497022 ECE1P42892 770 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 HNRNPA0Q13151 305 aaKnown RBP4.96□□□□□ -1.62
VPS26A-208ENST00000497022 POLNQ7Z5Q5 900 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 LDLRAD3Q86YD5 345 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 C2orf69Q8N8R5 385 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 SH3TC2Q8TF17 1288 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 CACTINQ8WUQ7 758 aaKnown RBP4.96□□□□□ -1.62
VPS26A-208ENST00000497022 NEU4Q8WWR8 484 aaPredicted RBP4.96□□□□□ -1.62
VPS26A-208ENST00000497022 ASB15Q8WXK1 588 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 UBXN4Q92575 508 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 FAM89AQ96GI7 184 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 GBP4Q96PP9 640 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 CRAMP1Q96RY5 1269 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 ZDHHC5Q9C0B5 715 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 KANSL2Q9H9L4 492 aa4.96□□□□□ -1.62
VPS26A-208ENST00000497022 RASSF10A6NK89 507 aa4.95□□□□□ -1.62
VPS26A-208ENST00000497022 FOXP2O15409 715 aa4.95□□□□□ -1.62
VPS26A-208ENST00000497022 ADH4P08319 380 aa4.95□□□□□ -1.62
VPS26A-208ENST00000497022 ZBTB48P10074 688 aaPredicted RBP4.95□□□□□ -1.62
VPS26A-208ENST00000497022 ACO1P21399 889 aaKnown RBP4.95□□□□□ -1.62
VPS26A-208ENST00000497022 SDHAP31040 664 aa4.95□□□□□ -1.62
VPS26A-208ENST00000497022 ETV4P43268 484 aa4.95□□□□□ -1.62
VPS26A-208ENST00000497022 MECP2P51608 486 aaKnown RBP4.95□□□□□ -1.62
VPS26A-208ENST00000497022 RAC3P60763 192 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms