RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 LINC01553A4QN01 128 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 WDR64B1ANS9 1081 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 KIF28PB7ZC32 967 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 C22orf31O95567 290 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 AMHP03971 560 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 CLCN3P51790 818 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 PRKCEQ02156 737 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 Q4G0T1 1027 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 RSPH3Q86UC2 560 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 MBOAT7Q96N66 472 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 DDX25Q9UHL0 483 aaKnown RBP13.8□□□□□ -0.2
HDLBP-246ENST00000496569 PCDHA2Q9Y5H9 948 aa13.8□□□□□ -0.2
HDLBP-246ENST00000496569 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 SMIM35A0A1B0GVV1 85 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 VTNP04004 478 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 CYP3A7P24462 503 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 MIER3Q7Z3K6 550 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 SMAP1Q8IYB5 467 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-246ENST00000496569 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 LRRC71Q8N4P6 559 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 TNFRSF25Q93038 417 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 RAD9AQ99638 391 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 C17orf80Q9BSJ5 609 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 C22orf23Q9BZE7 217 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 COL1A2P08123 1366 aa13.79□□□□□ -0.2
HDLBP-246ENST00000496569 EML1O00423 815 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 CCNT1O60563 726 aaKnown RBP13.78□□□□□ -0.2
HDLBP-246ENST00000496569 EFCAB14O75071 495 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 OATP04181 439 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 KRT2P35908 639 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 SLC26A2P50443 739 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 GRB10Q13322 594 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 KIZQ2M2Z5 673 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 ZNF484Q5JVG2 852 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 B3GNT9Q6UX72 402 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 RTN4RL1Q86UN2 441 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-246ENST00000496569 METTL13Q8N6R0 699 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 RIT2Q99578 217 aa13.78□□□□□ -0.2
HDLBP-246ENST00000496569 CELF4Q9BZC1 486 aaKnown RBP13.78□□□□□ -0.2
HDLBP-246ENST00000496569 BTBD18B2RXH4 712 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 DLL1O00548 723 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 MGEA5O60502 916 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 LPXNO60711 386 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 XBP1P17861 261 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 GATMP50440 423 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-246ENST00000496569 DRP2Q13474 957 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 MTERF2Q49AM1 385 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 IER5Q5VY09 327 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
HDLBP-246ENST00000496569 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-246ENST00000496569 APBB2Q92870 758 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 TOP1MTQ969P6 601 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 TTC28Q96AY4 2481 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 OSMRQ99650 979 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 KCNMB3Q9NPA1 279 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 SEPT9Q9UHD8 586 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-246ENST00000496569 VAV3Q9UKW4 847 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 PADI3Q9ULW8 664 aa13.77□□□□□ -0.21
HDLBP-246ENST00000496569 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
HDLBP-246ENST00000496569 M0QZ92 97 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 ENPP3O14638 875 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 STBD1O95210 358 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 MMP1P03956 469 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 JAK3P52333 1124 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 NFX1Q12986 1120 aaKnown RBP13.76□□□□□ -0.21
HDLBP-246ENST00000496569 MOXD1Q6UVY6 613 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 WASF1Q92558 559 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 HAS1Q92839 578 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 SUGCTQ9HAC7 445 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 BMP2KQ9NSY1 1161 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-246ENST00000496569 WRAP73Q9P2S5 460 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-246ENST00000496569 LIMCH1Q9UPQ0 1083 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 MTCH2Q9Y6C9 303 aa13.76□□□□□ -0.21
HDLBP-246ENST00000496569 CSPG5O95196 566 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
HDLBP-246ENST00000496569 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 FGFR4P22455 802 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 SFNP31947 248 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 ERVK-21P61565 698 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 PAK2Q13177 524 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 NCAPH2Q6IBW4 605 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 EFCAB12Q6NXP0 572 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 FAM228AQ86W67 206 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 FAM177A1Q8N128 213 aaPredicted RBP13.75□□□□□ -0.21
HDLBP-246ENST00000496569 LINC01465Q8N7H1 131 aa13.75□□□□□ -0.21
HDLBP-246ENST00000496569 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
HDLBP-246ENST00000496569 TNPO1Q92973 898 aaKnown RBP13.75□□□□□ -0.21
HDLBP-246ENST00000496569 FAM167AQ96KS9 214 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms