RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 LRFN3Q9BTN0 628 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 GLT8D2Q9H1C3 349 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 ZNF302Q9NR11 478 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 LRFN2Q9ULH4 789 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 NLRC5Q86WI3 1866 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 NCOR1O75376 2440 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
RNF220-217ENST00000496262 ATG7O95352 703 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 RB1P06400 928 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.43
RNF220-217ENST00000496262 DDIT3P35638 169 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
RNF220-217ENST00000496262 BLOC1S2Q6QNY1 142 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 ABHD15Q6UXT9 468 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 NPAS4Q8IUM7 802 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 ATP8B4Q8TF62 1192 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 CCDC12Q8WUD4 166 aaPredicted RBP12.36□□□□□ -0.43
RNF220-217ENST00000496262 CLP1Q92989 425 aaKnown RBP12.36□□□□□ -0.43
RNF220-217ENST00000496262 ZNF689Q96CS4 500 aaPredicted RBP12.36□□□□□ -0.43
RNF220-217ENST00000496262 GBP4Q96PP9 640 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 FTHL17Q9BXU8 183 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 TMX1Q9H3N1 280 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 KAT6AQ92794 2004 aa12.36□□□□□ -0.43
RNF220-217ENST00000496262 IGLV3-22A0A075B6J6 115 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 IGKV6D-21A0A0A0MT36 114 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 DHX15O43143 795 aaKnown RBP12.35□□□□□ -0.43
RNF220-217ENST00000496262 HBP1O60381 514 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 RPS6KA5O75582 802 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 STAG3L1P0CL83 205 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 SLC26A2P50443 739 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 RCAN1P53805 252 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 HYAL1Q12794 435 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 PUS10Q3MIT2 529 aaKnown RBP12.35□□□□□ -0.43
RNF220-217ENST00000496262 PRR16Q569H4 304 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 NIPA1Q7RTP0 329 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 CMTR2Q8IYT2 770 aaKnown RBP12.35□□□□□ -0.43
RNF220-217ENST00000496262 KIAA0319LQ8IZA0 1049 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 METTL13Q8N6R0 699 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 LMAN2LQ9H0V9 348 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 GZF1Q9H116 711 aaPredicted RBP12.35□□□□□ -0.43
RNF220-217ENST00000496262 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 C11orf16Q9NQ32 467 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 NOC2LQ9Y3T9 749 aaKnown RBP12.35□□□□□ -0.43
RNF220-217ENST00000496262 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 SQORQ9Y6N5 450 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 RALGAPA2Q2PPJ7 1873 aa12.35□□□□□ -0.43
RNF220-217ENST00000496262 BRWD1Q9NSI6 2320 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 DENND3A2RUS2 1198 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 LINC01565O15544 149 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
RNF220-217ENST00000496262 CHMP2AO43633 222 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 MGEA5O60502 916 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 MMP1P03956 469 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 VTNP04004 478 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 ITGB1P05556 798 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 CYP3A4P08684 503 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 RPS6KB1P23443 525 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 HSPA4P34932 840 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 CCT2P78371 535 aaKnown RBP12.34□□□□□ -0.43
RNF220-217ENST00000496262 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
RNF220-217ENST00000496262 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
RNF220-217ENST00000496262 PKN1Q16512 942 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 KIZQ2M2Z5 673 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
RNF220-217ENST00000496262 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 NME8Q8N427 588 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 KLHL23Q8NBE8 558 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 TMEM40Q8WWA1 233 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 OSMRQ99650 979 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 PLVAPQ9BX97 442 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 ZMYND12Q9H0C1 365 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
RNF220-217ENST00000496262 VPS54Q9P1Q0 977 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 PLAGL2Q9UPG8 496 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 PCDHB7Q9Y5E2 793 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
RNF220-217ENST00000496262 COL1A2P08123 1366 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 ZBTB42B2RXF5 422 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 PI4K2BG5E9Z4 385 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 TBX10O75333 385 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 C22orf31O95567 290 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 PSAPP07602 524 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 ATP4AP20648 1035 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 DNAJB1P25685 340 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 GNA11P29992 359 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 LTBRP36941 435 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 PLA2G5P39877 138 aa12.33□□□□□ -0.44
RNF220-217ENST00000496262 SARSP49591 514 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms