RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 ZNF746Q6NUN9 644 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-214ENST00000495485 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 SLC30A10Q6XR72 485 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-214ENST00000495485 OTUD6AQ7L8S5 288 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 VSIG10LQ86VR7 867 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 CREBRFQ8IUR6 639 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 SMAP1Q8IYB5 467 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-214ENST00000495485 ANKLE1Q8NAG6 615 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 SLC17A8Q8NDX2 589 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 NPLOC4Q8TAT6 608 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 GJA10Q969M2 543 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 DNAJC19Q96DA6 116 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 DYDC2Q96IM9 177 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 PAK6Q9NQU5 681 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-214ENST00000495485 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 KCNG1Q9UIX4 513 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 ODF2LQ9ULJ1 636 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 NFASCO94856 1347 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 DNAH12Q6ZR08 3092 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 CEP290O15078 2479 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 NKRFO15226 690 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 SEPT4O43236 478 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 EIF3JO75822 258 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 FAM13AO94988 1023 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 LYPLA2O95372 231 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 CYBAP13498 195 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 AKR1A1P14550 325 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 ELNP15502 786 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 QARSP47897 775 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 KCNJ6P48051 423 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 DNM2P50570 870 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 PSMC5P62195 406 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 FKBP3Q00688 224 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 CYP4A11Q02928 519 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 EHHADHQ08426 723 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 ECM1Q16610 540 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 FKBP15Q5T1M5 1219 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 ARMCX2Q7L311 632 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 KCNK18Q7Z418 384 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 CEP63Q96MT8 703 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 SENP7Q9BQF6 1050 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 NUP58Q9BVL2 599 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 NAA15Q9BXJ9 866 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 BHMT2Q9H2M3 363 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 UNC45AQ9H3U1 944 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 DBR1Q9UK59 544 aaKnown RBP11.34□□□□□ -0.59
HDAC3-214ENST00000495485 Q9Y3F1 56 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 ITIH6Q6UXX5 1313 aa11.34□□□□□ -0.59
HDAC3-214ENST00000495485 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 EML1O00423 815 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 TUBB4AP04350 444 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 PSAPP07602 524 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 TGFB3P10600 412 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 SKILP12757 684 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 CCL5P13501 91 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 RPL13P26373 211 aaKnown RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 ABCD1P33897 745 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 ACVR2BQ13705 512 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 ALCAMQ13740 583 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 GIT2Q14161 759 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 CTTNQ14247 550 aaKnown RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 EDRF1Q3B7T1 1238 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 DNTTIP2Q5QJE6 756 aaKnown RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 ANKRD40Q6AI12 368 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 TTI2Q6NXR4 508 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 B3GNT9Q6UX72 402 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 C4orf19Q8IY42 314 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 KIAA1524Q8TCG1 905 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 SH3TC2Q8TF17 1288 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 LRRC15Q8TF66 581 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 ATP6V0A1Q93050 837 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 CCDC51Q96ER9 411 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 ZNF830Q96NB3 372 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 NAP1L5Q96NT1 182 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 UIMC1Q96RL1 719 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 LXNQ9BS40 222 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 RNF208Q9H0X6 261 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 SPC25Q9HBM1 224 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 OLFML3Q9NRN5 406 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 ANKEF1Q9NU02 776 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 LARSQ9P2J5 1176 aaKnown RBP11.33□□□□□ -0.6
HDAC3-214ENST00000495485 FAM184BQ9ULE4 1060 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms