RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CELF3Q5SZQ8 465 aaKnown RBP10.47□□□□□ -0.73
GARNL3-219ENST00000495172 LAIR1Q6GTX8 287 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 KIAA1211LQ6NV74 962 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 TSHZ1Q6ZSZ6 1077 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 GPR149Q86SP6 731 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 AACSQ86V21 672 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 ZNF444Q8N0Y2 327 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-219ENST00000495172 SYTL5Q8TDW5 730 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-219ENST00000495172 MPHOSPH6Q99547 160 aaKnown RBP10.47□□□□□ -0.73
GARNL3-219ENST00000495172 SCNM1Q9BWG6 230 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 BCO2Q9BYV7 579 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 CPVLQ9H3G5 476 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 C1orf115Q9H7X2 142 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 IGSF9Q9P2J2 1179 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 COL12A1Q99715 3063 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 MYH7P12883 1935 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 FAM170BA6NMN3 283 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 NT5C1B-RDH14C9J2C7 533 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 CXCL14O95715 111 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 GNAI3P08754 354 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 PDE4AP27815 886 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 STXBP2Q15833 593 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 SLC22A17Q8WUG5 538 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
GARNL3-219ENST00000495172 DDX1Q92499 740 aaKnown RBP10.46□□□□□ -0.73
GARNL3-219ENST00000495172 MYL10Q9BUA6 226 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 EPB41L4AQ9HCS5 686 aaPredicted RBP10.46□□□□□ -0.73
GARNL3-219ENST00000495172 NGRNQ9NPE2 291 aaKnown RBP10.46□□□□□ -0.73
GARNL3-219ENST00000495172 ARPP21Q9UBL0 812 aaPredicted RBP10.46□□□□□ -0.73
GARNL3-219ENST00000495172 RAB23Q9ULC3 237 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 PADI3Q9ULW8 664 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 HDAC5Q9UQL6 1122 aa10.46□□□□□ -0.73
GARNL3-219ENST00000495172 TEX15Q9BXT5 2789 aa10.46□□□□□ -0.74
GARNL3-219ENST00000495172 DOCK6Q96HP0 2047 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-219ENST00000495172 KANSL1LA0AUZ9 987 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 GSG1L2A8MUP6 293 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 GNAI2P04899 355 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 STAG3L1P0CL83 205 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 TSPY3P0CV98 308 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 TSPY8P0CW00 308 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 UBA1P22314 1058 aaKnown RBP10.45□□□□□ -0.74
GARNL3-219ENST00000495172 STARD6P59095 220 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 GPC5P78333 572 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 TFAP4Q01664 338 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 ZNF252P-AS1Q0IIN9 211 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
GARNL3-219ENST00000495172 WTAPQ15007 396 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 LETM2Q2VYF4 491 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
GARNL3-219ENST00000495172 STPG1Q5TH74 334 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 KCNT2Q6UVM3 1135 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 CABP7Q86V35 215 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 IL31RAQ8NI17 732 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 RMDN3Q96TC7 470 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 FAM49AQ9H0Q0 323 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-219ENST00000495172 IL1RAPL2Q9NP60 686 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 STX8Q9UNK0 236 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 LZTS1Q9Y250 596 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 GPSM3Q9Y4H4 160 aa10.45□□□□□ -0.74
GARNL3-219ENST00000495172 HRO43593 1189 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 MYCLP12524 364 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-219ENST00000495172 TDGF1P13385 188 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 TARSP26639 723 aaKnown RBP10.44□□□□□ -0.74
GARNL3-219ENST00000495172 SP4Q02446 784 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 MTAPQ13126 283 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 TTF1Q15361 905 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-219ENST00000495172 NEDD1Q8NHV4 660 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 GPR20Q99678 358 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 IL17RBQ9NRM6 502 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 ANKFY1Q9P2R3 1169 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 PUF60Q9UHX1 559 aaKnown RBP10.44□□□□□ -0.74
GARNL3-219ENST00000495172 PCDHB7Q9Y5E2 793 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 GREB1Q4ZG55 1949 aa10.44□□□□□ -0.74
GARNL3-219ENST00000495172 TMEM8BA6NDV4 472 aa10.43□□□□□ -0.74
GARNL3-219ENST00000495172 NOVA1P51513 510 aaKnown RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 MRPS6P82932 125 aaKnown RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 SBK1Q52WX2 424 aa10.43□□□□□ -0.74
GARNL3-219ENST00000495172 TMED8Q6PL24 325 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 TMEM173Q86WV6 379 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 NSUN6Q8TEA1 469 aaKnown RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 LSM14BQ9BX40 385 aaKnown RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 PRMT8Q9NR22 394 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-219ENST00000495172 DZANK1Q9NVP4 752 aa10.43□□□□□ -0.74
GARNL3-219ENST00000495172 NUMBLQ9Y6R0 609 aa10.43□□□□□ -0.74
GARNL3-219ENST00000495172 EIF4E1BA6NMX2 242 aaKnown RBP10.42□□□□□ -0.74
GARNL3-219ENST00000495172 NR3C2P08235 984 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 LAG3P18627 525 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 SARSP49591 514 aaKnown RBP10.42□□□□□ -0.74
GARNL3-219ENST00000495172 METAP2P50579 478 aaKnown RBP eCLIP10.42□□□□□ -0.74
GARNL3-219ENST00000495172 IGBP1P78318 339 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 SIM2Q14190 667 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-219ENST00000495172 ARHGEF16Q5VV41 709 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 IFNLR1Q8IU57 520 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-219ENST00000495172 MLXIPQ9HAP2 919 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 LTB4R2Q9NPC1 389 aa10.42□□□□□ -0.74
GARNL3-219ENST00000495172 RNF19AQ9NV58 838 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms