RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 MCTP2Q6DN12 878 aa25.09■■□□□ 1.61
HDDC3-203ENST00000494993 Q6ZUG5 572 aa25.09■■□□□ 1.61
HDDC3-203ENST00000494993 C5orf42Q9H799 3197 aa25.09■■□□□ 1.61
HDDC3-203ENST00000494993 ADAMTS3O15072 1205 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 ATP4AP20648 1035 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 SETQ01105 290 aaPredicted RBP25.08■■□□□ 1.61
HDDC3-203ENST00000494993 NFX1Q12986 1120 aaKnown RBP25.08■■□□□ 1.61
HDDC3-203ENST00000494993 CAMK1Q14012 370 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 SWSAP1Q6NVH7 229 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 FAM43BQ6ZT52 329 aaPredicted RBP25.08■■□□□ 1.61
HDDC3-203ENST00000494993 KIAA0319LQ8IZA0 1049 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 REXO1Q8N1G1 1221 aaKnown RBP25.08■■□□□ 1.61
HDDC3-203ENST00000494993 CCDC12Q8WUD4 166 aaPredicted RBP25.08■■□□□ 1.61
HDDC3-203ENST00000494993 BRF1Q92994 677 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 JAKMIP1Q96N16 626 aaKnown RBP25.08■■□□□ 1.61
HDDC3-203ENST00000494993 UIMC1Q96RL1 719 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 ZNF577Q9BSK1 485 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 C6orf50Q9HD87 102 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 ERVK-5Q9HDB9 667 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 PRKAG3Q9UGI9 489 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 LRFN2Q9ULH4 789 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 GINS2Q9Y248 185 aa25.08■■□□□ 1.61
HDDC3-203ENST00000494993 ARIH1Q9Y4X5 557 aaPredicted RBP25.08■■□□□ 1.61
HDDC3-203ENST00000494993 ZBTB42B2RXF5 422 aa25.07■■□□□ 1.6
HDDC3-203ENST00000494993 ITGB1P05556 798 aa25.07■■□□□ 1.6
HDDC3-203ENST00000494993 SARSP49591 514 aaKnown RBP25.07■■□□□ 1.6
HDDC3-203ENST00000494993 ZP2Q05996 745 aa25.07■■□□□ 1.6
HDDC3-203ENST00000494993 PKN1Q16512 942 aa25.07■■□□□ 1.6
HDDC3-203ENST00000494993 ZNF746Q6NUN9 644 aaPredicted RBP25.07■■□□□ 1.6
HDDC3-203ENST00000494993 CDHR5Q9HBB8 845 aa25.07■■□□□ 1.6
HDDC3-203ENST00000494993 TBC1D22BQ9NU19 505 aa25.07■■□□□ 1.6
HDDC3-203ENST00000494993 NOC2LQ9Y3T9 749 aaKnown RBP25.07■■□□□ 1.6
HDDC3-203ENST00000494993 PRPF3O43395 683 aaKnown RBP25.06■■□□□ 1.6
HDDC3-203ENST00000494993 MGEA5O60502 916 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 RPS6KA5O75582 802 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 DNAJB1P25685 340 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 GTF2F1P35269 517 aaKnown RBP eCLIP25.06■■□□□ 1.6
HDDC3-203ENST00000494993 GATMP50440 423 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 DLX2Q07687 328 aaPredicted RBP25.06■■□□□ 1.6
HDDC3-203ENST00000494993 BLOC1S2Q6QNY1 142 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 KLHL23Q8NBE8 558 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 SPPL3Q8TCT6 385 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 TMEM40Q8WWA1 233 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 IGFLR1Q9H665 355 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 SNX14Q9Y5W7 946 aa25.06■■□□□ 1.6
HDDC3-203ENST00000494993 TBX10O75333 385 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 ALADP13716 330 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 GNA11P29992 359 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 HSPA4P34932 840 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 CLUL1Q15846 466 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 ODR4Q5SWX8 454 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 ADHFE1Q8IWW8 467 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 CKAP2LQ8IYA6 745 aa25.05■■□□□ 1.6
HDDC3-203ENST00000494993 SMAP1Q8IYB5 467 aaPredicted RBP25.05■■□□□ 1.6
HDDC3-203ENST00000494993 BBXQ8WY36 941 aaPredicted RBP25.05■■□□□ 1.6
HDDC3-203ENST00000494993 MAFBQ9Y5Q3 323 aaPredicted RBP25.05■■□□□ 1.6
HDDC3-203ENST00000494993 C19orf67A6NJJ6 358 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 C22orf31O95567 290 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 IBSPP21815 317 aaPredicted RBP25.04■■□□□ 1.6
HDDC3-203ENST00000494993 SMAD2Q15796 467 aaKnown RBP25.04■■□□□ 1.6
HDDC3-203ENST00000494993 FBXL16Q8N461 479 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 PHKBQ93100 1093 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 PPP2R3CQ969Q6 453 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 RGS18Q9NS28 235 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 C1orf112Q9NSG2 853 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 TCEAL9Q9UHQ7 104 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 ST3GAL5Q9UNP4 418 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 PCDHB7Q9Y5E2 793 aa25.04■■□□□ 1.6
HDDC3-203ENST00000494993 DENND3A2RUS2 1198 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 PRR33A8MZF0 331 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 GPR182O15218 404 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 LINC01565O15544 149 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 MBTPS2O43462 519 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 PSAPP07602 524 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 CIITAP33076 1130 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 ADAM15Q13444 863 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 PRR16Q569H4 304 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 RASGRP4Q8TDF6 673 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 POF1BQ8WVV4 589 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 PPP1R16BQ96T49 567 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 ADAM2Q99965 735 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 AGXT2Q9BYV1 514 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 RNF216Q9NWF9 866 aaPredicted RBP25.03■■□□□ 1.6
HDDC3-203ENST00000494993 PCDHA10Q9Y5I2 948 aa25.03■■□□□ 1.6
HDDC3-203ENST00000494993 DCXO43602 365 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 RPS6KB1P23443 525 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 IRS1P35568 1242 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 CRYBB1P53674 252 aaPredicted RBP25.02■■□□□ 1.6
HDDC3-203ENST00000494993 AKAP17AQ02040 695 aaKnown RBP25.02■■□□□ 1.6
HDDC3-203ENST00000494993 SMAD4Q13485 552 aaKnown RBP25.02■■□□□ 1.6
HDDC3-203ENST00000494993 NTRK3Q16288 839 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 KIZQ2M2Z5 673 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 SLC24A5Q71RS6 500 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 CCDC148Q8NFR7 591 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 BICD2Q8TD16 824 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 OSMRQ99650 979 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 RNF26Q9BY78 433 aaPredicted RBP25.02■■□□□ 1.6
HDDC3-203ENST00000494993 GABBR1Q9UBS5 961 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 CD207Q9UJ71 328 aa25.02■■□□□ 1.6
HDDC3-203ENST00000494993 C9IYK1 514 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms