RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.7□□□□□ -0.385e-8■□□□□ 10.3
HDLBP-245ENST00000494862 LCTP09848 1927 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 A0A1W2PQC6 194 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 CALUO43852 315 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-245ENST00000494862 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
HDLBP-245ENST00000494862 ATG7O95352 703 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 GCNT3O95395 438 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 SUPT20HL2P0C7V6 817 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 MYBP10242 640 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 TGFB3P10600 412 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 MAPTP10636 758 aaKnown RBP12.69□□□□□ -0.38
HDLBP-245ENST00000494862 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-245ENST00000494862 DNM2P50570 870 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 CASP5P51878 434 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 SP2Q02086 613 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 UBXN1Q04323 297 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
HDLBP-245ENST00000494862 MAPK7Q13164 816 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 NEDD9Q14511 834 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 CST9Q5W186 159 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 OTUD6AQ7L8S5 288 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 PPFIBP1Q86W92 1011 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 MORC4Q8TE76 937 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 CCDC43Q96MW1 224 aaKnown RBP12.69□□□□□ -0.38
HDLBP-245ENST00000494862 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
HDLBP-245ENST00000494862 GABBR1Q9UBS5 961 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 TRAF3IP3Q9Y228 551 aa12.69□□□□□ -0.38
HDLBP-245ENST00000494862 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 AKR1B15C9JRZ8 316 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-245ENST00000494862 PDXKO00764 312 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 BACH1O14867 736 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 CETN3O15182 167 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 HIP1RO75146 1068 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 STBD1O95210 358 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 PGK2P07205 417 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 TPM1P09493 284 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 UBA1P22314 1058 aaKnown RBP12.68□□□□□ -0.38
HDLBP-245ENST00000494862 HOXD13P35453 343 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 KCNJ6P48051 423 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 TRIM14Q14142 442 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.382e-16■■□□□ 12.7
HDLBP-245ENST00000494862 MAN2A1Q16706 1144 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 XKR9Q5GH70 373 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 SWSAP1Q6NVH7 229 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 CYFIP1Q7L576 1253 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 ZNF720Q7Z2F6 126 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 FAM178BQ8IXR5 827 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 ABRAQ8N0Z2 381 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 DAW1Q8N136 415 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 FIZ1Q96SL8 496 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
HDLBP-245ENST00000494862 PORCNQ9H237 461 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 TMX1Q9H3N1 280 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 POLD4Q9HCU8 107 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
HDLBP-245ENST00000494862 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
HDLBP-245ENST00000494862 ASB14A6NK59 587 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 ZNF862O60290 1169 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 USO1O60763 962 aaKnown RBP12.67□□□□□ -0.38
HDLBP-245ENST00000494862 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
HDLBP-245ENST00000494862 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
HDLBP-245ENST00000494862 HUNKP57058 714 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 TBC1D8BQ0IIM8 1120 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 ALCAMQ13740 583 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 NFIL3Q16649 462 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 VWA3BQ502W6 1294 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 ODR4Q5SWX8 454 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 ANO5Q75V66 913 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-245ENST00000494862 ANKRD13CQ8N6S4 541 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 TC2NQ8N9U0 490 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 CCDC51Q96ER9 411 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 DRC1Q96MC2 740 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 PANX2Q96RD6 677 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
HDLBP-245ENST00000494862 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
HDLBP-245ENST00000494862 LOXHD1Q8IVV2 1947 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 SYNGAP1Q96PV0 1343 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 IGSF9BQ9UPX0 1349 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 IGKV6D-21A0A0A0MT36 114 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 PES1O00541 588 aaKnown RBP12.66□□□□□ -0.38
HDLBP-245ENST00000494862 STRNO43815 780 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-245ENST00000494862 PLS3P13797 630 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 RPL13P26373 211 aaKnown RBP12.66□□□□□ -0.38
HDLBP-245ENST00000494862 PRKCEQ02156 737 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 SP4Q02446 784 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 RBL2Q08999 1139 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 ADAM9Q13443 819 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 ZNF792Q3KQV3 632 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 XKR3Q5GH77 459 aa12.66□□□□□ -0.38
HDLBP-245ENST00000494862 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
HDLBP-245ENST00000494862 PLA2G4FQ68DD2 849 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms