RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 GUCY2FP51841 1108 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 GJA9P57773 515 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 NKX3-2P78367 333 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 CD300LDQ6UXZ3 194 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 LHFPL2Q6ZUX7 228 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 FERMT3Q86UX7 667 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 SPATS2Q86XZ4 545 aaKnown RBP3.79□□□□□ -1.8
LRIF1-203ENST00000494675 FAM126BQ8IXS8 530 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 DLG3Q92796 817 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 ELF4Q99607 663 aaPredicted RBP3.79□□□□□ -1.8
LRIF1-203ENST00000494675 PDGFDQ9GZP0 370 aaPredicted RBP3.79□□□□□ -1.8
LRIF1-203ENST00000494675 NGRNQ9NPE2 291 aaKnown RBP3.79□□□□□ -1.8
LRIF1-203ENST00000494675 SLC5A4Q9NY91 659 aa3.79□□□□□ -1.8
LRIF1-203ENST00000494675 A0A1B0GTL3 188 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 SH3D21A4FU49 640 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 ACOT7O00154 380 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 DVL2O14641 736 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 PRICKLE3O43900 615 aaPredicted RBP3.78□□□□□ -1.8
LRIF1-203ENST00000494675 PLA2G1BP04054 148 aaKnown RBP3.78□□□□□ -1.8
LRIF1-203ENST00000494675 PTX3P26022 381 aaPredicted RBP3.78□□□□□ -1.8
LRIF1-203ENST00000494675 DDB1Q16531 1140 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 VWA3BQ502W6 1294 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 BROXQ5VW32 411 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 CREB3L3Q68CJ9 461 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 CC2D1AQ6P1N0 951 aaPredicted RBP3.78□□□□□ -1.8
LRIF1-203ENST00000494675 TEPPQ6URK8 271 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 HDGFL2Q7Z4V5 671 aaPredicted RBP3.78□□□□□ -1.8
LRIF1-203ENST00000494675 MIB1Q86YT6 1006 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 CARFQ8N187 725 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 SLC5A5Q92911 643 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 DDX56Q9NY93 547 aaKnown RBP3.78□□□□□ -1.8
LRIF1-203ENST00000494675 PHLDB1Q86UU1 1377 aa3.78□□□□□ -1.8
LRIF1-203ENST00000494675 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.78□□□□□ -1.81
LRIF1-203ENST00000494675 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.78□□□□□ -1.81
LRIF1-203ENST00000494675 FOXP2O15409 715 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 RAB11FIP3O75154 756 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 ULK1O75385 1050 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 LRG1P02750 347 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 C4BPAP04003 597 aaKnown RBP3.78□□□□□ -1.81
LRIF1-203ENST00000494675 MMEP08473 750 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 MC3RP41968 323 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 NECAB2Q7Z6G3 386 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 ADGRG2Q8IZP9 1017 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 FAM26EQ8N5C1 309 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 SMARCC2Q8TAQ2 1214 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 ERCC4Q92889 916 aaPredicted RBP3.78□□□□□ -1.81
LRIF1-203ENST00000494675 GBP4Q96PP9 640 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 ARHGAP28Q9P2N2 729 aa3.78□□□□□ -1.81
LRIF1-203ENST00000494675 TGM5O43548 720 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 CYP2C8P10632 490 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 LSP1P33241 339 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 CNR2P34972 360 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 MAGEA10P43363 369 aaPredicted RBP3.77□□□□□ -1.81
LRIF1-203ENST00000494675 HERVK_113P62684 666 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 HTRA3P83110 453 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 SMAD3P84022 425 aaKnown RBP3.77□□□□□ -1.81
LRIF1-203ENST00000494675 ITKQ08881 620 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 DBPQ10586 325 aaPredicted RBP3.77□□□□□ -1.81
LRIF1-203ENST00000494675 SMAD2Q15796 467 aaKnown RBP3.77□□□□□ -1.81
LRIF1-203ENST00000494675 CR1LQ2VPA4 569 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 CATSPEREQ5SY80 951 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 ZZZ3Q8IYH5 903 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 HIPK4Q8NE63 616 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 ZNF526Q8TF50 670 aaPredicted RBP3.77□□□□□ -1.81
LRIF1-203ENST00000494675 COG1Q8WTW3 980 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 NOX5Q96PH1 765 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 CEP89Q96ST8 783 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 PUS7LQ9H0K6 701 aaKnown RBP3.77□□□□□ -1.81
LRIF1-203ENST00000494675 NTMQ9P121 344 aa3.77□□□□□ -1.81
LRIF1-203ENST00000494675 NOBOXO60393 691 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 KATNA1O75449 491 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 PDGFRBP09619 1106 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 SDHAP31040 664 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 FNTBP49356 437 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 SESN3P58005 492 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 FAPQ12884 760 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 TERF2Q15554 542 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 CD276Q5ZPR3 534 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 VASNQ6EMK4 673 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 NME9Q86XW9 330 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 ASB15Q8WXK1 588 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 MTMR8Q96EF0 704 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 TYW1Q9NV66 732 aaKnown RBP3.76□□□□□ -1.81
LRIF1-203ENST00000494675 NOC2LQ9Y3T9 749 aaKnown RBP3.76□□□□□ -1.81
LRIF1-203ENST00000494675 WASHC2CQ9Y4E1 1318 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 RASSF10A6NK89 507 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 ITGB3P05106 788 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 C8BP07358 591 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 ENO2P09104 434 aaPredicted RBP3.76□□□□□ -1.81
LRIF1-203ENST00000494675 CD40P25942 277 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 PHC1P78364 1004 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 ZXDAP98168 799 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 EXOSC10Q01780 885 aaKnown RBP3.76□□□□□ -1.81
LRIF1-203ENST00000494675 PFKPQ01813 784 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 MTMR1Q13613 665 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 LRRC32Q14392 662 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 BRDTQ58F21 947 aaPredicted RBP3.76□□□□□ -1.81
LRIF1-203ENST00000494675 TMC5Q6UXY8 1006 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 RASSF3Q86WH2 238 aa3.76□□□□□ -1.81
LRIF1-203ENST00000494675 CNTD1Q8N815 330 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms