RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 EFHBQ8N7U6 833 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 INTS4Q96HW7 963 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 PPP1R16BQ96T49 567 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 POP1Q99575 1024 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 PLVAPQ9BX97 442 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 LY9Q9HBG7 655 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 ERAP1Q9NZ08 941 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 KIF3AQ9Y496 699 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 NID2Q14112 1375 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 CCDC196A0A1B0GTZ2 297 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 GOLGA8BA8MQT2 603 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 DDAH1O94760 285 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 CD2BP2O95400 341 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 CMTR2Q8IYT2 770 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 ZNF654Q8IZM8 581 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 CUL5Q93034 780 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 P2RX5Q93086 422 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 RRP36Q96EU6 259 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 TCEANC2Q96MN5 208 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 KCNH6Q9H252 994 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 GINS2Q9Y248 185 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 TRPV2Q9Y5S1 764 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 UBIAD1Q9Y5Z9 338 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 FRYLO94915 3013 aa13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 FNDC1Q4ZHG4 1894 aaPredicted RBP13.37□□□□□ -0.27
CSNK1E-212ENST00000494610 KLF18A0A0U1RQI7 1052 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 PIK3CDO00329 1044 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 CDKL5O76039 1030 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 ARP10275 920 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 SCG2P13521 617 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 COASYQ13057 564 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 MTMR1Q13613 665 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 CUL4AQ13619 759 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 GPRASP2Q96D09 838 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 SNX27Q96L92 541 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 SMOC2Q9H3U7 446 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 SMARCAD1Q9H4L7 1026 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 TLE6Q9H808 572 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-212ENST00000494610 TBKBP1A7MCY6 615 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 ZBTB43O43298 467 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 PFKFB2O60825 505 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 FGFR1P11362 822 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 PBX3P40426 434 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 METAP2P50579 478 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■□□□ 12
CSNK1E-212ENST00000494610 TRAF1Q13077 416 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 PAK2Q13177 524 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 CBX2Q14781 532 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 LLGL2Q6P1M3 1020 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 APOA5Q6Q788 366 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 BMP8AQ7Z5Y6 402 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 FEZF2Q8TBJ5 459 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 GTF3C6Q969F1 213 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 ASIC4Q96FT7 647 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 LLPHQ9BRT6 129 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 SPZ1Q9BXG8 430 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 CELF4Q9BZC1 486 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 JADE2Q9NQC1 790 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 TPCN1Q9ULQ1 816 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 PCDHA6Q9UN73 950 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 NOC2LQ9Y3T9 749 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 PCDHA8Q9Y5H6 950 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 EVPLQ92817 2033 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 IGSF9BQ9UPX0 1349 aa13.35□□□□□ -0.27
CSNK1E-212ENST00000494610 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 DDX39AO00148 427 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 CPLX1O14810 134 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 KIF5BP33176 963 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 ACTR2P61160 394 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 ITGB3BPQ13352 177 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 SPOUT1Q5T280 376 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 IER5Q5VY09 327 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 TYW1BQ6NUM6 668 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 XRRA1Q6P2D8 792 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 FBXL6Q8N531 539 aa13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 GIMAP8Q8ND71 665 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-212ENST00000494610 ATP8B4Q8TF62 1192 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms