RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 FOXO1Q12778 655 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 AUHQ13825 339 aaKnown RBP7.76□□□□□ -1.17
SNX13-210ENST00000494402 SNX17Q15036 470 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 PDCD1Q15116 288 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 PCSK7Q16549 785 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 NOL9Q5SY16 702 aaKnown RBP7.76□□□□□ -1.17
SNX13-210ENST00000494402 DENND5AQ6IQ26 1287 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 FRMD7Q6ZUT3 714 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 HFE2Q6ZVN8 426 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 OTOP1Q7RTM1 612 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 C12orf40Q86WS4 652 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 ERC1Q8IUD2 1116 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 PPIL6Q8IXY8 311 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 TEX9Q8N6V9 391 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 MSANTD4Q8NCY6 345 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 ZMIZ2Q8NF64 920 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 BAHD1Q8TBE0 780 aaPredicted RBP7.76□□□□□ -1.17
SNX13-210ENST00000494402 IPCEF1Q8WWN9 437 aaPredicted RBP7.76□□□□□ -1.17
SNX13-210ENST00000494402 CGRRF1Q99675 332 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 FAM167BQ9BTA0 163 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 USP26Q9BXU7 913 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 TSPY26PQ9H489 355 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 SOX17Q9H6I2 414 aaPredicted RBP7.76□□□□□ -1.17
SNX13-210ENST00000494402 NOL6Q9H6R4 1146 aaKnown RBP7.76□□□□□ -1.17
SNX13-210ENST00000494402 PICK1Q9NRD5 415 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 GPR27Q9NS67 375 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 DACT1Q9NYF0 836 aa7.76□□□□□ -1.17
SNX13-210ENST00000494402 CCDC66A2RUB6 948 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 GOLGA6L3A6NEY3 463 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 TISP43B9A030 160 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 B9A039 149 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 SOAT2O75908 522 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 TSHRP16473 764 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 EIF2AK2P19525 551 aaKnown RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 MUTP22033 750 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 KIF5BP33176 963 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 PSMC1P62191 440 aaKnown RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 ST5P78524 1137 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 SMAD3P84022 425 aaKnown RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 AMPD2Q01433 879 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 GSTM4Q03013 218 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 GALNT1Q10472 559 aaPredicted RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 PPP2R5CQ13362 524 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 PMS2P11Q13670 270 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 MBTPS1Q14703 1052 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 PLCL1Q15111 1095 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 ZNF174Q15697 407 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 SMAD2Q15796 467 aaKnown RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 PFKFB4Q16877 469 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 PKDCCQ504Y2 493 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 FBXO47Q5MNV8 452 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 PLBD1Q6P4A8 553 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 CPLX2Q6PUV4 134 aaKnown RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 SIAH1Q8IUQ4 282 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 THEMISQ8N1K5 641 aaPredicted RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 MICALL1Q8N3F8 863 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 CCDC33Q8N5R6 958 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 ATG16L2Q8NAA4 619 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 ERCC4Q92889 916 aaPredicted RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 COA7Q96BR5 231 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 HIC2Q96JB3 615 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 ADPGKQ9BRR6 497 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 COLEC11Q9BWP8 271 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 SORBS1Q9BX66 1292 aaKnown RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 PNPLA8Q9NP80 782 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 SEL1LQ9UBV2 794 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 TUBD1Q9UJT1 453 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 ZNF112Q9UJU3 913 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 MAFFQ9ULX9 164 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 GPR55Q9Y2T6 319 aaPredicted RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 RRP7AQ9Y3A4 280 aaKnown RBP7.75□□□□□ -1.17
SNX13-210ENST00000494402 SH3BP1Q9Y3L3 701 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 FHOD1Q9Y613 1164 aa7.75□□□□□ -1.17
SNX13-210ENST00000494402 LOC100996750A0A140TA64 210 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 FAM187AA6NFU0 413 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 PGPEP1LA6NFU8 196 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 ZBTB42B2RXF5 422 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 APOA4P06727 396 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 SLC3A2P08195 630 aaKnown RBP7.74□□□□□ -1.17
SNX13-210ENST00000494402 MTHFD1P11586 935 aaKnown RBP7.74□□□□□ -1.17
SNX13-210ENST00000494402 OSMP13725 252 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 RHOQP17081 205 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 SLC16A1P53985 500 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 BPIFB3P59826 476 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 NEUROD1Q13562 356 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 MPEG1Q2M385 716 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 TOR2AQ5JU69 321 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 VSIG1Q86XK7 387 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 GALNT13Q8IUC8 556 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 HID1Q8IV36 788 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 LIX1LQ8IVB5 337 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 ANKRD52Q8NB46 1076 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 KREMEN2Q8NCW0 462 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 SYTL5Q8TDW5 730 aaPredicted RBP7.74□□□□□ -1.17
SNX13-210ENST00000494402 SSH3Q8TE77 659 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 NANOS1Q8WY41 292 aaKnown RBP7.74□□□□□ -1.17
SNX13-210ENST00000494402 KATNAL1Q9BW62 490 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 BOCQ9BWV1 1114 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms