RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 TBC1D32Q96NH3 1257 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 SH2D3AQ9BRG2 576 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
ATG4B-224ENST00000494132 ZBED2Q9BTP6 218 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 KCNMB3Q9NPA1 279 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 TRPV2Q9Y5S1 764 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 COL6A3P12111 3177 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 SMIM35A0A1B0GVV1 85 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 C22orf31O95567 290 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 OATP04181 439 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 FOSL2P15408 326 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 GCFC2P16383 781 aaKnown RBP16.56■□□□□ 0.24
ATG4B-224ENST00000494132 METTL13Q8N6R0 699 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 PHOSPHO2Q8TCD6 241 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 SEPT9Q9UHD8 586 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-224ENST00000494132 VAV3Q9UKW4 847 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 TTC3P53804 2025 aa16.56■□□□□ 0.24
ATG4B-224ENST00000494132 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-224ENST00000494132 M0QZ92 97 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 UPP2O95045 317 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 CD52P31358 61 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 CLCN3P51790 818 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
ATG4B-224ENST00000494132 MKRN4PQ13434 485 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-224ENST00000494132 TMEM266Q2M3C6 531 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 MTERF2Q49AM1 385 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 IER5Q5VY09 327 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 KIAA0319LQ8IZA0 1049 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 LRRC71Q8N4P6 559 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 TMX3Q96JJ7 454 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 ZNF668Q96K58 619 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-224ENST00000494132 FAM167AQ96KS9 214 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 AGO3Q9H9G7 860 aaKnown RBP16.55■□□□□ 0.24
ATG4B-224ENST00000494132 CDHR5Q9HBB8 845 aa16.55■□□□□ 0.24
ATG4B-224ENST00000494132 KIAA1671Q9BY89 1806 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 RFXAPO00287 272 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 GJB5O95377 273 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 AMHP03971 560 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 VTNP04004 478 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 PPP2R5CQ13362 524 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 SAFBQ15424 915 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATG4B-224ENST00000494132 TSHZ1Q6ZSZ6 1077 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 FAM20AQ96MK3 541 aa16.54■□□□□ 0.24
ATG4B-224ENST00000494132 CELF4Q9BZC1 486 aaKnown RBP16.54■□□□□ 0.24
ATG4B-224ENST00000494132 PRRC2BQ5JSZ5 2229 aaKnown RBP16.53■□□□□ 0.24
ATG4B-224ENST00000494132 EFCAB14O75071 495 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 IBSPP21815 317 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-224ENST00000494132 TAP1Q03518 808 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 PLA2G4FQ68DD2 849 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 EFCAB12Q6NXP0 572 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 RDM1Q8NG50 284 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 TMEM40Q8WWA1 233 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 APBB2Q92870 758 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 NAP1L4Q99733 375 aaKnown RBP16.53■□□□□ 0.24
ATG4B-224ENST00000494132 SUGCTQ9HAC7 445 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 NRBP2Q9NSY0 501 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 WRAP73Q9P2S5 460 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-224ENST00000494132 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 CEP131Q9UPN4 1083 aa16.53■□□□□ 0.24
ATG4B-224ENST00000494132 EPOPA6NHQ4 379 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 TBX3O15119 743 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 STBD1O95210 358 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 MCM7P33993 719 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 GNL2Q13823 731 aaKnown RBP16.52■□□□□ 0.24
ATG4B-224ENST00000494132 ADGRE1Q14246 886 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 CALCRLQ16602 461 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 KIZQ2M2Z5 673 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 MAFAQ8NHW3 353 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-224ENST00000494132 LINC01599Q8WXQ3 324 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 PPM1EQ8WY54 764 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 ARNTL2Q8WYA1 636 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 GAS2L1Q99501 681 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-224ENST00000494132 OSMRQ99650 979 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 BACH2Q9BYV9 841 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 TMEM60Q9H2L4 133 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 RGL1Q9NZL6 768 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 PADI3Q9ULW8 664 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 AKT3Q9Y243 479 aa16.52■□□□□ 0.24
ATG4B-224ENST00000494132 NOC2LQ9Y3T9 749 aaKnown RBP16.52■□□□□ 0.24
ATG4B-224ENST00000494132 RALGAPA2Q2PPJ7 1873 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 NEMFO60524 1076 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 BAG4O95429 457 aaKnown RBP16.51■□□□□ 0.23
ATG4B-224ENST00000494132 IGFBP4P22692 258 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 TXKP42681 527 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 PSMC5P62195 406 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 CYP4A11Q02928 519 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 SPIRE1Q08AE8 756 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 TBC1D8BQ0IIM8 1120 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 NFX1Q12986 1120 aaKnown RBP16.51■□□□□ 0.23
ATG4B-224ENST00000494132 PAK2Q13177 524 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 DRP2Q13474 957 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 CTTNQ14247 550 aaKnown RBP16.51■□□□□ 0.23
ATG4B-224ENST00000494132 NBR1Q14596 966 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 ZNF174Q15697 407 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 XKR3Q5GH77 459 aa16.51■□□□□ 0.23
ATG4B-224ENST00000494132 ANO5Q75V66 913 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms