RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 THEGQ9P2T0 379 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 GABBR1Q9UBS5 961 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 PCDHA4Q9UN74 947 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-219ENST00000494069 TRPV2Q9Y5S1 764 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 SMIM35A0A1B0GVV1 85 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 CHMP2AO43633 222 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 GTPBP6O43824 516 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 ZNF862O60290 1169 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 DEXIO95424 95 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 LARGE1O95461 756 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 AK2P54819 239 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 SETQ01105 290 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 UGCGQ16739 394 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 IER5Q5VY09 327 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 ERICH6BQ5W0A0 696 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 FAM160B1Q5W0V3 765 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 MCTP2Q6DN12 878 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 ZNF746Q6NUN9 644 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 TSHZ1Q6ZSZ6 1077 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 CKAP2LQ8IYA6 745 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 KIAA0319LQ8IZA0 1049 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 BLIDQ8IZY5 108 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 ATXN2LQ8WWM7 1075 aaKnown RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 APBB2Q92870 758 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 CELF4Q9BZC1 486 aaKnown RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 SLKQ9H2G2 1235 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 TMX1Q9H3N1 280 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 UNC45AQ9H3U1 944 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 TBC1D22BQ9NU19 505 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 GINS2Q9Y248 185 aa9.67□□□□□ -0.86
LRCH3-219ENST00000494069 COL4A4P53420 1690 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-219ENST00000494069 MGEA5O60502 916 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 PFKFB2O60825 505 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 C22orf31O95567 290 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 PSAPP07602 524 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 LINC00271P0C7V0 271 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 IBSPP21815 317 aaPredicted RBP9.66□□□□□ -0.86
LRCH3-219ENST00000494069 SLC26A2P50443 739 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 USP11P51784 963 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 KCNQ1P51787 676 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 MRPS5P82675 430 aaKnown RBP9.66□□□□□ -0.86
LRCH3-219ENST00000494069 KRT76Q01546 638 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 EPC2Q52LR7 807 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 ZNF484Q5JVG2 852 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 CPLX2Q6PUV4 134 aaKnown RBP9.66□□□□□ -0.86
LRCH3-219ENST00000494069 PDCD7Q8N8D1 485 aaKnown RBP9.66□□□□□ -0.86
LRCH3-219ENST00000494069 DAGLBQ8NCG7 672 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 FBXO22Q8NEZ5 403 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 OXER1Q8TDS5 423 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 SLC5A5Q92911 643 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 NECAB3Q96P71 396 aaPredicted RBP9.66□□□□□ -0.86
LRCH3-219ENST00000494069 PADI3Q9ULW8 664 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 NOC2LQ9Y3T9 749 aaKnown RBP9.66□□□□□ -0.86
LRCH3-219ENST00000494069 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 PCDHA10Q9Y5I2 948 aa9.66□□□□□ -0.86
LRCH3-219ENST00000494069 IGSF9BQ9UPX0 1349 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 TMEM150BA6NC51 233 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 FAM205CA6NFA0 338 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 WDR64B1ANS9 1081 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 SLC37A4O43826 429 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 GAS7O60861 476 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 PSMD10O75832 226 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 VTNP04004 478 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 BMP1P13497 986 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 FDPSP14324 419 aaKnown RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 GATMP50440 423 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 CLCN3P51790 818 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 NFX1Q12986 1120 aaKnown RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 ME3Q16798 604 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 INF2Q27J81 1249 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 KIZQ2M2Z5 673 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 Q4G0T1 1027 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 EARS2Q5JPH6 523 aaKnown RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 LRCH2Q5VUJ6 765 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 TMEM192Q8IY95 271 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 SMAP1Q8IYB5 467 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 NME8Q8N427 588 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 IL17RAQ96F46 866 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 ZNF668Q96K58 619 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 MBOAT7Q96N66 472 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 SH2D3AQ9BRG2 576 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 PHF20Q9BVI0 1012 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 TEKT3Q9BXF9 490 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 RC3H2Q9HBD1 1191 aaKnown RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 ERVK-5Q9HDB9 667 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 DISC1Q9NRI5 854 aa9.65□□□□□ -0.86
LRCH3-219ENST00000494069 ORC3Q9UBD5 711 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-219ENST00000494069 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
LRCH3-219ENST00000494069 COL1A2P08123 1366 aa9.64□□□□□ -0.87
LRCH3-219ENST00000494069 TTC28Q96AY4 2481 aa9.64□□□□□ -0.87
LRCH3-219ENST00000494069 KDM3AQ9Y4C1 1321 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms