RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 SLC12A3P55017 1021 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 CORO7P57737 925 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 POLR2FP61218 127 aaKnown RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 SNRPFP62306 86 aaKnown RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 KCNMA1Q12791 1236 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 KCNH2Q12809 1159 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 BIRC3Q13489 604 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 PPP2R5AQ15172 486 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 KIAA0753Q2KHM9 967 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 KRT26Q7Z3Y9 468 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 SLC17A8Q8NDX2 589 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 TRPM4Q8TD43 1214 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 ZDHHC15Q96MV8 337 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 RUNDC3BQ96NL0 473 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 PAGR1Q9BTK6 254 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 IDI2Q9BXS1 227 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 GANQ9H2C0 597 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 JAG2Q9Y219 1238 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 PCDHA1Q9Y5I3 950 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 A0A087WUV0 522 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 HEXIM1O94992 359 aaKnown RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 EYA4O95677 639 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 CPP00450 1065 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
RFC4-214ENST00000494047 GTF2IP78347 998 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 ARHGAP4P98171 946 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 SETQ01105 290 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 CETN1Q12798 172 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 TBC1D10BQ4KMP7 808 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 NFRKBQ6P4R8 1299 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 KDM7AQ6ZMT4 941 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 EPM2AIP1Q7L775 607 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 HS2ST1Q7LGA3 356 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 USP38Q8NB14 1042 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 TMEM174Q8WUU8 243 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 CRYGNQ8WXF5 182 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 INPP4AQ96PE3 977 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 SUCLA2Q9P2R7 463 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 FEZ2Q9UHY8 353 aaPredicted RBP12.55□□□□□ -0.4
RFC4-214ENST00000494047 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 PFASO15067 1338 aa12.55□□□□□ -0.4
RFC4-214ENST00000494047 GOLGA6L10A0A0M3HER8 536 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 P4HA2O15460 535 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 PALMO75781 387 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 NOL4O94818 638 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 PLEKP08567 350 aaPredicted RBP12.54□□□□□ -0.4
RFC4-214ENST00000494047 UCHL3P15374 230 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 STAT1P42224 750 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 EIF3BP55884 814 aaKnown RBP12.54□□□□□ -0.4
RFC4-214ENST00000494047 PICALMQ13492 652 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 QRICH1Q2TAL8 776 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 BTNL9Q6UXG8 535 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 YTHDF3Q7Z739 585 aaKnown RBP12.54□□□□□ -0.4
RFC4-214ENST00000494047 FBXO11Q86XK2 927 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 ETNPPLQ8TBG4 499 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 MORC4Q8TE76 937 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.54□□□□□ -0.4
RFC4-214ENST00000494047 WDR11Q9BZH6 1224 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 MYOZ2Q9NPC6 264 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 FAM114A2Q9NRY5 505 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 TMEM59LQ9UK28 342 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 ATRNL1Q5VV63 1379 aa12.54□□□□□ -0.4
RFC4-214ENST00000494047 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
RFC4-214ENST00000494047 EPHB6O15197 1021 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 ZNF185O15231 689 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 PHACTR2O75167 634 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 KIF4AO95239 1232 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 PSMC2P35998 433 aaKnown RBP12.53□□□□□ -0.4
RFC4-214ENST00000494047 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
RFC4-214ENST00000494047 HTRA3P83110 453 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 DRP2Q13474 957 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 GRIK5Q16478 980 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
RFC4-214ENST00000494047 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
RFC4-214ENST00000494047 SLFN13Q68D06 897 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 SULF1Q8IWU6 871 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms