RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 UGCGQ16739 394 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 CCSAPQ6IQ19 270 aaPredicted RBP16.62■□□□□ 0.25
ACTB-213ENST00000493945 NECAB2Q7Z6G3 386 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 MCPH1Q8NEM0 835 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
ACTB-213ENST00000493945 PCYT2Q99447 389 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 NIFKQ9BYG3 293 aaKnown RBP16.62■□□□□ 0.25
ACTB-213ENST00000493945 TNMDQ9H2S6 317 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 HAS3O00219 553 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 TLR3O15455 904 aaKnown RBP16.61■□□□□ 0.25
ACTB-213ENST00000493945 GRB10Q13322 594 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 ITGA7Q13683 1181 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 MTERF2Q49AM1 385 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 SESTD1Q86VW0 696 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 ZNF710Q8N1W2 664 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 CNNM3Q8NE01 707 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 RAD54LQ92698 747 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 TIGD1Q96MW7 591 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 ATP6V0A4Q9HBG4 840 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 CYP26B1Q9NR63 512 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 KCNG1Q9UIX4 513 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 HPSEQ9Y251 543 aa16.61■□□□□ 0.25
ACTB-213ENST00000493945 ZNF862O60290 1169 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 SLFN14P0C7P3 912 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 PLA2G4BP0C869 781 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 SMIM10L2AP0DMW4 78 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 SMIM10L2BP0DMW5 78 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 PTGS1P23219 599 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 RARRES1P49788 294 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 NDUFA8P51970 172 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 GRIK4Q16099 956 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 SKOR2Q2VWA4 1001 aaPredicted RBP16.6■□□□□ 0.25
ACTB-213ENST00000493945 TAF2Q6P1X5 1199 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 TRMT1LQ7Z2T5 733 aaKnown RBP16.6■□□□□ 0.25
ACTB-213ENST00000493945 RSPH3Q86UC2 560 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 CCDC155Q8N6L0 562 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
ACTB-213ENST00000493945 TBCAO75347 108 aaKnown RBP16.59■□□□□ 0.25
ACTB-213ENST00000493945 ZNF202O95125 648 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 INSRRP14616 1297 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 NBPF20Q3BBV1 942 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 USP49Q70CQ1 688 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 ANO5Q75V66 913 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
ACTB-213ENST00000493945 PIGOQ8TEQ8 1089 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 KAT2BQ92831 832 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 ABHD8Q96I13 439 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 DRC1Q96MC2 740 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 PLIN2Q99541 437 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 MTRQ99707 1265 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 SENP6Q9GZR1 1112 aaPredicted RBP16.59■□□□□ 0.25
ACTB-213ENST00000493945 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 GTF2IRD1Q9UHL9 959 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 TUBE1Q9UJT0 475 aa16.59■□□□□ 0.25
ACTB-213ENST00000493945 E9PMD0 336 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 M0QZ92 97 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 ARVCFO00192 962 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 IGBP1P78318 339 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 CDC42EP1Q00587 391 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 PLA2G4FQ68DD2 849 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 PADI6Q6TGC4 694 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 GPBP1Q86WP2 473 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 KIFAP3Q92845 792 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 PANK2Q9BZ23 570 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 RNPEPQ9H4A4 650 aa16.58■□□□□ 0.24
ACTB-213ENST00000493945 MYH11P35749 1972 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 USO1O60763 962 aaKnown RBP16.57■□□□□ 0.24
ACTB-213ENST00000493945 ABCD1P33897 745 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 EMC2Q15006 297 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 PPP2R5AQ15172 486 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 COL13A1Q5TAT6 717 aaPredicted RBP16.57■□□□□ 0.24
ACTB-213ENST00000493945 KRBA2Q6ZNG9 492 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 ELOA2Q8IYF1 753 aaPredicted RBP16.57■□□□□ 0.24
ACTB-213ENST00000493945 SLC17A8Q8NDX2 589 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 LMBR1Q8WVP7 490 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 GTPBP4Q9BZE4 634 aaKnown RBP16.57■□□□□ 0.24
ACTB-213ENST00000493945 WRAP73Q9P2S5 460 aaPredicted RBP16.57■□□□□ 0.24
ACTB-213ENST00000493945 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 ODF2LQ9ULJ1 636 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 TELO2Q9Y4R8 837 aa16.57■□□□□ 0.24
ACTB-213ENST00000493945 PHLPP2Q6ZVD8 1323 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 DCDC2CA8MYV0 355 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 CAND2O75155 1236 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 GADD45BO75293 160 aaPredicted RBP16.56■□□□□ 0.24
ACTB-213ENST00000493945 MAFO75444 373 aaPredicted RBP16.56■□□□□ 0.24
ACTB-213ENST00000493945 SMC2O95347 1197 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 ATP4AP20648 1035 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 SCP2P22307 547 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 GUCY2CP25092 1073 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 PSMC6P62333 389 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 DHX8Q14562 1220 aaKnown RBP16.56■□□□□ 0.24
ACTB-213ENST00000493945 MCM6Q14566 821 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 E2F4Q16254 413 aa16.56■□□□□ 0.24
ACTB-213ENST00000493945 C1orf53Q5VUE5 145 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms