RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DUSP10Q9Y6W6 482 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 MACROD2A1Z1Q3 448 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 FZD9O00144 591 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 PDXKO00764 312 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 FLOT1O75955 427 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 GCNT3O95395 438 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 MTMR2Q13614 643 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 CACNA2D4Q7Z3S7 1137 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 GSPT2Q8IYD1 628 aaKnown RBP15.13■□□□□ 0.01
VCP-207ENST00000493886 MSANTD4Q8NCY6 345 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 RIT2Q99578 217 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 FAN1Q9Y2M0 1017 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 RCCD1A6NED2 376 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 SFI1A8K8P3 1242 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 KRT86O43790 486 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 CALUO43852 315 aaPredicted RBP15.12■□□□□ 0.01
VCP-207ENST00000493886 ERLIN1O75477 346 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 FAM13AO94988 1023 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 VCAM1P19320 739 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 AMPD2Q01433 879 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 GHRHRQ02643 423 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 PDXDC1Q6P996 788 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 HDXQ7Z353 690 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 IL31RAQ8NI17 732 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 DRC1Q96MC2 740 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 NACC1Q96RE7 527 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 LACRTQ9GZZ8 138 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 WRAP73Q9P2S5 460 aaPredicted RBP15.12■□□□□ 0.01
VCP-207ENST00000493886 PPP1R9AQ9ULJ8 1098 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 BCRP11274 1271 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 GPS2Q13227 327 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 WHAMMP3Q1A5X7 153 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 MUM1L1Q5H9M0 696 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 MMS19Q96T76 1030 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 TYW1Q9NV66 732 aaKnown RBP15.12■□□□□ 0.01
VCP-207ENST00000493886 CD2APQ9Y5K6 639 aa15.12■□□□□ 0.01
VCP-207ENST00000493886 MYH10P35580 1976 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 ZNF185O15231 689 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 CASP8Q14790 479 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 SPA17Q15506 151 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 LSM14BQ9BX40 385 aaKnown RBP15.11■□□□□ 0.01
VCP-207ENST00000493886 RPAP3Q9H6T3 665 aaPredicted RBP15.11■□□□□ 0.01
VCP-207ENST00000493886 KCNH7Q9NS40 1196 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 CEP72Q9P209 647 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 RAB21Q9UL25 225 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 L1RE1Q9UN81 338 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 ASTN1O14525 1302 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 FRMPD4Q14CM0 1322 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 DDX39AO00148 427 aaKnown RBP15.11■□□□□ 0.01
VCP-207ENST00000493886 ZNF263O14978 683 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 NOL4O94818 638 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 EIF4A3P38919 411 aaKnown RBP15.11■□□□□ 0.01
VCP-207ENST00000493886 MRPS25P82663 173 aaKnown RBP15.11■□□□□ 0.01
VCP-207ENST00000493886 DCAF15Q66K64 600 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 MYCT1Q8N699 235 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 SYTL5Q8TDW5 730 aaPredicted RBP15.11■□□□□ 0.01
VCP-207ENST00000493886 LXNQ9BS40 222 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 CRACR2AQ9BSW2 395 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 PKD2L1Q9P0L9 805 aa15.11■□□□□ 0.01
VCP-207ENST00000493886 LRRIQ3A6PVS8 624 aaPredicted RBP15.1■□□□□ 0.01
VCP-207ENST00000493886 EPS15P42566 896 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 NOP2P46087 812 aaKnown RBP15.1■□□□□ 0.01
VCP-207ENST00000493886 KIF11P52732 1056 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 VAV2P52735 878 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 USP14P54578 494 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 KCNH2Q12809 1159 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 SPP2Q13103 211 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 ZSCAN26Q16670 478 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 NIPA1Q7RTP0 329 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 CCDC125Q86Z20 511 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 TXLNBQ8N3L3 684 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 EHBP1Q8NDI1 1231 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 DEF6Q9H4E7 631 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 PARVGQ9HBI0 331 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 NLRC4Q9NPP4 1024 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 ARMCX3Q9UH62 379 aaPredicted RBP15.1■□□□□ 0.01
VCP-207ENST00000493886 CTDP1Q9Y5B0 961 aaPredicted RBP15.1■□□□□ 0.01
VCP-207ENST00000493886 KCNA1Q09470 495 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 PCNX4Q63HM2 1172 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 PSMB7Q99436 277 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 UBIAD1Q9Y5Z9 338 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 EIF3DO15371 548 aaKnown RBP eCLIP15.1■□□□□ 0.012e-15■■□□□ 11.6
VCP-207ENST00000493886 ZBED4O75132 1171 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 NR3C1P04150 777 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 NMT1P30419 496 aaKnown RBP15.1■□□□□ 0.01
VCP-207ENST00000493886 TKFCQ3LXA3 575 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 MIER3Q7Z3K6 550 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 CAGE1Q8TC20 777 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 NEK9Q8TD19 979 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 MAP3K20Q9NYL2 800 aaKnown RBP15.1■□□□□ 0.01
VCP-207ENST00000493886 KCND2Q9NZV8 630 aa15.1■□□□□ 0.01
VCP-207ENST00000493886 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 AKR1B10O60218 316 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 RPL13P26373 211 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 POLR2FP61218 127 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms