RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 VAMP4O75379 141 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 RALBP11234 206 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 KCTD2Q14681 263 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 ICE2Q659A1 982 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 CAPRIN2Q6IMN6 1127 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 EMBQ6PCB8 327 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 FAM167BQ9BTA0 163 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 TM6SF1Q9BZW5 370 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 VPS11Q9H270 941 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 ZWILCHQ9H900 591 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 GCNT4Q9P109 453 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 AQRO60306 1485 aaKnown RBP eCLIP8.4□□□□□ -1.064e-10■■■■■ 36.9
BRCA1-221ENST00000493795 RASA4BC9J798 803 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 RASA4O43374 803 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 PSMA2P25787 234 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 ALDH1B1P30837 517 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 ZAP70P43403 619 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 CAV1Q03135 178 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 TTC30AQ86WT1 665 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 RAB42Q8N4Z0 105 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 THOC1Q96FV9 657 aaKnown RBP8.4□□□□□ -1.07
BRCA1-221ENST00000493795 ECT2Q9H8V3 914 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 EML4Q9HC35 981 aaKnown RBP8.4□□□□□ -1.07
BRCA1-221ENST00000493795 DMAP1Q9NPF5 467 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-221ENST00000493795 CCDC87Q9NVE4 849 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 TMEM63CQ9P1W3 806 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 KLHL8Q9P2G9 620 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-221ENST00000493795 CCNL1Q9UK58 526 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-221ENST00000493795 HPCAL4Q9UM19 191 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 NOS1P29475 1434 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 FLT4P35916 1363 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 ABCC12Q96J65 1359 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 CCDC195A0A1B0GUA6 201 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 TBC1D4O60343 1298 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 RASSF9O75901 435 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 TRIM54Q9BYV2 358 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 SENP1Q9P0U3 644 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 PCDHA13Q9Y5I0 950 aa8.4□□□□□ -1.07
BRCA1-221ENST00000493795 DIAPH2O60879 1101 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ARFIP2P53365 341 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CCNA1P78396 465 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CYP4A11Q02928 519 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CASP8Q14790 479 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 STXBP2Q15833 593 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CCNYL1Q8N7R7 359 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 SRPK1Q96SB4 655 aaKnown RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF577Q9BSK1 485 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 NXF1Q9UBU9 619 aaKnown RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 SEPT3Q9UH03 358 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ASXL1Q8IXJ9 1541 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 PPIP5K1Q6PFW1 1433 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 C5orf58C9J3I9 102 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 KLRF2D3W0D1 207 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF197O14709 1029 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 KCNA2P16389 499 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CXCR5P32302 372 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 RAD23BP54727 409 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 SPDYE7PQ495Y7 208 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CERKLQ49MI3 558 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 TLK2Q86UE8 772 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 TBC1D19Q8N5T2 526 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 FANCBQ8NB91 859 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 C19orf60Q96EN9 201 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CALR3Q96L12 384 aaKnown RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 AK8Q96MA6 479 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 AP1M1Q9BXS5 423 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 PARD6BQ9BYG5 372 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 NHEJ1Q9H9Q4 299 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 TMEM161AQ9NX61 479 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 H2AFY2Q9P0M6 372 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 BLOC1S6Q9UL45 172 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CFAP73A6NFT4 308 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 TOM1O60784 492 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 PFKFB2O60825 505 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 CCDC22O60826 627 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 SEC24DO94855 1032 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 SERPINB1P30740 379 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ST13P50502 369 aaKnown RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ICA1Q05084 483 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 LRRC47Q8N1G4 583 aaKnown RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 TADA1Q96BN2 335 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF594Q96JF6 807 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 USP28Q96RU2 1077 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 BRIP1Q9BX63 1249 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF556Q9HAH1 456 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 TMEM191CA6NGB0 347 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ABCE1P61221 599 aaKnown RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 GOLGA8FQ08AF8 430 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ME3Q16798 604 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 LVRNQ6Q4G3 990 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 DPP9Q86TI2 863 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 DDIASQ8IXT1 998 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ELMOD1Q8N336 334 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 ST13P5Q8NFI4 369 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-221ENST00000493795 RBM41Q96IZ5 413 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms