RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ADCK5Q3MIX3 580 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 TSGA10IPQ3SY00 556 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 BMP2KLQ5H9B9 411 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 FAM160B1Q5W0V3 765 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 ADGRD2Q7Z7M1 963 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 CCDC60Q8IWA6 550 aaPredicted RBP19.78■□□□□ 0.76
COL9A1-210ENST00000493682 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 KIAA0319LQ8IZA0 1049 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 POF1BQ8WVV4 589 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 PPP2R3CQ969Q6 453 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 POP1Q99575 1024 aaKnown RBP19.78■□□□□ 0.76
COL9A1-210ENST00000493682 GINS2Q9Y248 185 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 KIAA1671Q9BY89 1806 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 LOXHD1Q8IVV2 1947 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 KLF18A0A0U1RQI7 1052 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 DHX15O43143 795 aaKnown RBP19.77■□□□□ 0.76
COL9A1-210ENST00000493682 MGEA5O60502 916 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 IBSPP21815 317 aaPredicted RBP19.77■□□□□ 0.76
COL9A1-210ENST00000493682 CDC27P30260 824 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 NDUFV1P49821 464 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 JAKMIP3Q5VZ66 844 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 PDXDC2PQ6P474 469 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 PLA2G4DQ86XP0 818 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 MSLNLQ96KJ4 702 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 ZNF302Q9NR11 478 aa19.77■□□□□ 0.76
COL9A1-210ENST00000493682 NOC2LQ9Y3T9 749 aaKnown RBP19.77■□□□□ 0.76
COL9A1-210ENST00000493682 COL1A2P08123 1366 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 IGLV3-22A0A075B6J6 115 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 ZBTB42B2RXF5 422 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 ATP4AP20648 1035 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 ZNF484Q5JVG2 852 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 SWSAP1Q6NVH7 229 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 FAM43BQ6ZT52 329 aaPredicted RBP19.76■□□□□ 0.75
COL9A1-210ENST00000493682 SKAP1Q86WV1 359 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 EFHBQ8N7U6 833 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 TMEM40Q8WWA1 233 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 CRYGNQ8WXF5 182 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 PCDHB7Q9Y5E2 793 aa19.76■□□□□ 0.75
COL9A1-210ENST00000493682 C5orf42Q9H799 3197 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 IPO5O00410 1097 aaKnown RBP19.75■□□□□ 0.75
COL9A1-210ENST00000493682 RPS6KA5O75582 802 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 EYA4O95677 639 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 CYP3A4P08684 503 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 NRIP1P48552 1158 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 RCAN1P53805 252 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 PFKFB3Q16875 520 aaPredicted RBP19.75■□□□□ 0.75
COL9A1-210ENST00000493682 MIS18BP1Q6P0N0 1132 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 ADAM2Q99965 735 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 RGS18Q9NS28 235 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 CLEC1BQ9P126 229 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 ST3GAL5Q9UNP4 418 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 PCDHGC5Q9Y5F6 944 aa19.75■□□□□ 0.75
COL9A1-210ENST00000493682 DENND3A2RUS2 1198 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 ADAMTS3O15072 1205 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 PPFIA3O75145 1194 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 ADD1P35611 737 aaKnown RBP19.74■□□□□ 0.75
COL9A1-210ENST00000493682 KRT32Q14532 448 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 SLC24A5Q71RS6 500 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 RBM23Q86U06 439 aaKnown RBP19.74■□□□□ 0.75
COL9A1-210ENST00000493682 RNF135Q8IUD6 432 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 C1orf112Q9NSG2 853 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 MUTYHQ9UIF7 546 aa19.74■□□□□ 0.75
COL9A1-210ENST00000493682 NAP1L2Q9ULW6 460 aaPredicted RBP19.74■□□□□ 0.75
COL9A1-210ENST00000493682 TBKBP1A7MCY6 615 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 C9IYK1 514 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 GPR182O15218 404 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 C22orf31O95567 290 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 GLP2RO95838 553 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 KIZQ2M2Z5 673 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 HERC4Q5GLZ8 1057 aaPredicted RBP19.73■□□□□ 0.75
COL9A1-210ENST00000493682 ODR4Q5SWX8 454 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 SPOUT1Q5T280 376 aaKnown RBP19.73■□□□□ 0.75
COL9A1-210ENST00000493682 FAM102BQ5T8I3 360 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 CKAP2LQ8IYA6 745 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 SMRP1Q8NCR6 262 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 PPP1R16BQ96T49 567 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 ZNF577Q9BSK1 485 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 PCDHB12Q9Y5F1 795 aa19.73■□□□□ 0.75
COL9A1-210ENST00000493682 MAFBQ9Y5Q3 323 aaPredicted RBP19.73■□□□□ 0.75
COL9A1-210ENST00000493682 MUC6Q6W4X9 2439 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 ESYT2A0FGR8 921 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 HMGB1P09429 215 aaKnown RBP19.72■□□□□ 0.75
COL9A1-210ENST00000493682 CRYBB1P53674 252 aaPredicted RBP19.72■□□□□ 0.75
COL9A1-210ENST00000493682 COASYQ13057 564 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 ZNF746Q6NUN9 644 aaPredicted RBP19.72■□□□□ 0.75
COL9A1-210ENST00000493682 HFE2Q6ZVN8 426 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 BBXQ8WY36 941 aaPredicted RBP19.72■□□□□ 0.75
COL9A1-210ENST00000493682 OSMRQ99650 979 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 ZMYND12Q9H0C1 365 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 TLE6Q9H808 572 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 AAASQ9NRG9 546 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 TBC1D22BQ9NU19 505 aa19.72■□□□□ 0.75
COL9A1-210ENST00000493682 BARX2Q9UMQ3 279 aaPredicted RBP19.72■□□□□ 0.75
COL9A1-210ENST00000493682 PLXNA4Q9HCM2 1894 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 CCDC196A0A1B0GTZ2 297 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 CPA1P15085 419 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 METAP2P50579 478 aaKnown RBP eCLIP19.71■□□□□ 0.75
COL9A1-210ENST00000493682 FAM189BP81408 668 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 FGD1P98174 961 aa19.71■□□□□ 0.75
COL9A1-210ENST00000493682 SETQ01105 290 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms