RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 PAN2Q504Q3 1202 aaKnown RBP16.59■□□□□ 0.25
ATG4B-223ENST00000493618 KIAA0319LQ8IZA0 1049 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-223ENST00000493618 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 UBE2ZQ9H832 354 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-223ENST00000493618 RC3H2Q9HBD1 1191 aaKnown RBP16.59■□□□□ 0.25
ATG4B-223ENST00000493618 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 MAFBQ9Y5Q3 323 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-223ENST00000493618 EPB41L2O43491 1005 aaKnown RBP16.58■□□□□ 0.24
ATG4B-223ENST00000493618 DGKIO75912 1065 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 LINC00271P0C7V0 271 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 GATMP50440 423 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 PTPROQ16827 1216 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 SMAP1Q8IYB5 467 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-223ENST00000493618 NME8Q8N427 588 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 TBCKQ8TEA7 893 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 ZNF689Q96CS4 500 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-223ENST00000493618 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 PCDHA4Q9UN74 947 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 NOC2LQ9Y3T9 749 aaKnown RBP16.58■□□□□ 0.24
ATG4B-223ENST00000493618 PCDHA10Q9Y5I2 948 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 SQORQ9Y6N5 450 aa16.58■□□□□ 0.24
ATG4B-223ENST00000493618 KDM3AQ9Y4C1 1321 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 MGEA5O60502 916 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 DEXIO95424 95 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 TDP2O95551 362 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 C22orf31O95567 290 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 VTNP04004 478 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 KCNA5P22460 613 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 BMPR1AP36894 532 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 KIZQ2M2Z5 673 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 TCEAL5Q5H9L2 206 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 BANK1Q8NDB2 785 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 TMEM40Q8WWA1 233 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-223ENST00000493618 OSMRQ99650 979 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 FTHL17Q9BXU8 183 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 UNC45AQ9H3U1 944 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 ERVK-5Q9HDB9 667 aa16.57■□□□□ 0.24
ATG4B-223ENST00000493618 MRPL42Q9Y6G3 142 aaKnown RBP16.57■□□□□ 0.24
ATG4B-223ENST00000493618 BRWD1Q9NSI6 2320 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-223ENST00000493618 WDR64B1ANS9 1081 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 GRM6O15303 877 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 GAS7O60861 476 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 RPS6KA5O75582 802 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 USP11P51784 963 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 CLCN3P51790 818 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 UGCGQ16739 394 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 TIGD5Q53EQ6 642 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 LRCH2Q5VUJ6 765 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 NPAS4Q8IUM7 802 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 BLIDQ8IZY5 108 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 SLC5A5Q92911 643 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 ZNF668Q96K58 619 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-223ENST00000493618 TEKT3Q9BXF9 490 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 DISC1Q9NRI5 854 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 LRFN2Q9ULH4 789 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 KCNJ14Q9UNX9 436 aa16.56■□□□□ 0.24
ATG4B-223ENST00000493618 ZNF862O60290 1169 aa16.55■□□□□ 0.24
ATG4B-223ENST00000493618 SCRN1Q12765 414 aa16.55■□□□□ 0.24
ATG4B-223ENST00000493618 CRIPAKQ8N1N5 446 aa16.55■□□□□ 0.24
ATG4B-223ENST00000493618 LRRC71Q8N4P6 559 aa16.55■□□□□ 0.24
ATG4B-223ENST00000493618 NSUN3Q9H649 340 aaKnown RBP16.55■□□□□ 0.24
ATG4B-223ENST00000493618 ALG13Q9NP73 1137 aaKnown RBP16.55■□□□□ 0.24
ATG4B-223ENST00000493618 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
ATG4B-223ENST00000493618 ST3GAL5Q9UNP4 418 aa16.55■□□□□ 0.24
ATG4B-223ENST00000493618 C5orf67F2Z3F1 127 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 H3BQ06 376 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-223ENST00000493618 M0R2N6 131 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 OATP04181 439 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 RB1P06400 928 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 STAG3L1P0CL83 205 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 PRKCEQ02156 737 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 NPY5RQ15761 445 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 EFCAB12Q6NXP0 572 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
ATG4B-223ENST00000493618 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 CMTR2Q8IYT2 770 aaKnown RBP16.54■□□□□ 0.24
ATG4B-223ENST00000493618 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-223ENST00000493618 CLP1Q92989 425 aaKnown RBP16.54■□□□□ 0.24
ATG4B-223ENST00000493618 FAM167AQ96KS9 214 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 RIT2Q99578 217 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 ADAM2Q99965 735 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 C11orf84Q9BUA3 381 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-223ENST00000493618 GJB4Q9NTQ9 266 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 TPCN1Q9ULQ1 816 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 AKT3Q9Y243 479 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 RWDD3Q9Y3V2 267 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 MYO7AQ13402 2215 aa16.54■□□□□ 0.24
ATG4B-223ENST00000493618 DENND3A2RUS2 1198 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 TMEM150BA6NC51 233 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 GPR32O75388 356 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 SARSP49591 514 aaKnown RBP16.53■□□□□ 0.24
ATG4B-223ENST00000493618 CRYBB1P53674 252 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-223ENST00000493618 INF2Q27J81 1249 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 LEXMQ3ZCV2 418 aa16.53■□□□□ 0.24
ATG4B-223ENST00000493618 Q4G0T1 1027 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms