RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
HDAC4-210ENST00000493582 COL4A3BPQ9Y5P4 624 aa12.7□□□□□ -0.38
HDAC4-210ENST00000493582 MYH4Q9Y623 1939 aa12.7□□□□□ -0.38
HDAC4-210ENST00000493582 GLI3P10071 1580 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 FGFR4P22455 802 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 LAMB3Q13751 1172 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 CHRNA2Q15822 529 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 ZC3H12AQ5D1E8 599 aaKnown RBP12.69□□□□□ -0.38
HDAC4-210ENST00000493582 HEATR3Q7Z4Q2 680 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 RASGEF1CQ8N431 466 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 AIPL1Q9NZN9 384 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 NAGPAQ9UK23 515 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 LRRC42Q9Y546 428 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 ABCB11O95342 1321 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 RAD23BP54727 409 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 DR1Q01658 176 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 KLRC3Q07444 240 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 COBLL1Q53SF7 1204 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 RNF220Q5VTB9 566 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 UNC13DQ70J99 1090 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 TEX9Q8N6V9 391 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 ERP44Q9BS26 406 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 ERVK-5Q9HDB9 667 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 TRMT112Q9UI30 125 aaKnown RBP12.69□□□□□ -0.38
HDAC4-210ENST00000493582 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 AGTP01019 485 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 GNAZP19086 355 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 TXKP42681 527 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 ADAM9Q13443 819 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 C6orf118Q5T5N4 469 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 IRF2BP2Q7Z5L9 587 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 NLRP10Q86W26 655 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 LONP2Q86WA8 852 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 GALNT15Q8N3T1 639 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 GBP7Q8N8V2 638 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-210ENST00000493582 CALML4Q96GE6 196 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 AK8Q96MA6 479 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 RPS6KC1Q96S38 1066 aa12.69□□□□□ -0.38
HDAC4-210ENST00000493582 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-210ENST00000493582 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-210ENST00000493582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.69□□□□□ -0.38
HDAC4-210ENST00000493582 H0Y3Z8 333 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 TMEM154Q6P9G4 183 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 NT5DC3Q86UY8 548 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 EXOC3L1Q86VI1 746 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 DRAXINQ8NBI3 349 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-210ENST00000493582 GDAP1Q8TB36 358 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 EPAS1Q99814 870 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 TSG101Q99816 390 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 RPTORQ8N122 1335 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 FKBP3Q00688 224 aaKnown RBP12.68□□□□□ -0.38
HDAC4-210ENST00000493582 MGAT5Q09328 741 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 ZNF211Q13398 564 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-210ENST00000493582 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-210ENST00000493582 ZDHHC24Q6UX98 284 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 SPATA21Q7Z572 469 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 ANKRD42Q8N9B4 389 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-210ENST00000493582 RXFP1Q9HBX9 757 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 STXBP5LQ9Y2K9 1186 aa12.68□□□□□ -0.38
HDAC4-210ENST00000493582 RASGRF2O14827 1237 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 LGR5O75473 907 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 GRB10Q13322 594 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 AUHQ13825 339 aaKnown RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 THEMISQ8N1K5 641 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 EZH1Q92800 747 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 DDX23Q9BUQ8 820 aaKnown RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 ANKIB1Q9P2G1 1089 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 ARL2BPQ9Y2Y0 163 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 BTNL10A8MVZ5 291 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 LAD1O00515 517 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 GH1P01241 217 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 GM2AP17900 193 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 SLC9A1P19634 815 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 CALB2P22676 271 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 GBP1P32455 592 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 RFC5P40937 340 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 POLE2P56282 527 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 COL23A1Q86Y22 540 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 LMNTD2Q8IXW0 634 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 ANKLE1Q8NAG6 615 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 DDX12PQ92771 950 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 OSGEPQ9NPF4 335 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 DLGAP2Q9P1A6 1054 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 SUCLA2Q9P2R7 463 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 TMEM120BA0PK00 339 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 GCLCP48506 637 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 ARHGAP27Q6ZUM4 889 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms