RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TCF7P36402 384 aaPredicted RBP15.02■□□□□ -0
MSH6-208ENST00000493177 CCT6AP40227 531 aaKnown RBP15.02■□□□□ -0
MSH6-208ENST00000493177 ACTR2P61160 394 aa15.02■□□□□ -0
MSH6-208ENST00000493177 SPIRE1Q08AE8 756 aa15.02■□□□□ -0
MSH6-208ENST00000493177 PTK7Q13308 1070 aa15.02■□□□□ -0
MSH6-208ENST00000493177 EPHA7Q15375 998 aa15.02■□□□□ -0
MSH6-208ENST00000493177 RESP18Q5W5W9 173 aa15.02■□□□□ -0
MSH6-208ENST00000493177 HAUS3Q68CZ6 603 aa15.02■□□□□ -0
MSH6-208ENST00000493177 FAM109BQ6ICB4 259 aaPredicted RBP15.02■□□□□ -0
MSH6-208ENST00000493177 MIS18BP1Q6P0N0 1132 aa15.02■□□□□ -0
MSH6-208ENST00000493177 CCDC73Q6ZRK6 1079 aa15.02■□□□□ -0
MSH6-208ENST00000493177 USP49Q70CQ1 688 aa15.02■□□□□ -0
MSH6-208ENST00000493177 LRRC8DQ7L1W4 858 aa15.02■□□□□ -0
MSH6-208ENST00000493177 SMAP1Q8IYB5 467 aaPredicted RBP15.02■□□□□ -0
MSH6-208ENST00000493177 GLG1Q92896 1179 aa15.02■□□□□ -0
MSH6-208ENST00000493177 ATP6V0A1Q93050 837 aa15.02■□□□□ -0
MSH6-208ENST00000493177 CALML4Q96GE6 196 aa15.02■□□□□ -0
MSH6-208ENST00000493177 C16orf70Q9BSU1 422 aa15.02■□□□□ -0
MSH6-208ENST00000493177 MTMR10Q9NXD2 777 aa15.02■□□□□ -0
MSH6-208ENST00000493177 CCDC39Q9UFE4 941 aa15.02■□□□□ -0
MSH6-208ENST00000493177 MSRAQ9UJ68 235 aa15.02■□□□□ -0
MSH6-208ENST00000493177 BACH1O14867 736 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 PSAPP07602 524 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 SMIM10L2AP0DMW4 78 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 SMIM10L2BP0DMW5 78 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 GNAT1P11488 350 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 SELPP16109 830 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 PFKFB1P16118 471 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 ZNF200P98182 395 aaPredicted RBP15.01□□□□□ -0.01
MSH6-208ENST00000493177 CYP4A11Q02928 519 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 NFKBIBQ15653 356 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 TRIM50Q86XT4 487 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 RDM1Q8NG50 284 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 SEPT1Q8WYJ6 367 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 TIFAQ96CG3 184 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 DYDC2Q96IM9 177 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 PLIN2Q99541 437 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 EIF2AK1Q9BQI3 630 aaKnown RBP15.01□□□□□ -0.01
MSH6-208ENST00000493177 PANK2Q9BZ23 570 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 TELO2Q9Y4R8 837 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 PCDHA10Q9Y5I2 948 aa15.01□□□□□ -0.01
MSH6-208ENST00000493177 KDM3AQ9Y4C1 1321 aa15□□□□□ -0.01
MSH6-208ENST00000493177 TMEM265A0A087WTH1 108 aa15□□□□□ -0.01
MSH6-208ENST00000493177 GRXCR1A8MXD5 290 aa15□□□□□ -0.01
MSH6-208ENST00000493177 PARNO95453 639 aaKnown RBP15□□□□□ -0.01
MSH6-208ENST00000493177 CKBP12277 381 aa15□□□□□ -0.01
MSH6-208ENST00000493177 MARK3P27448 753 aa15□□□□□ -0.01
MSH6-208ENST00000493177 THPOP40225 353 aa15□□□□□ -0.01
MSH6-208ENST00000493177 KCNJ6P48051 423 aa15□□□□□ -0.01
MSH6-208ENST00000493177 CTTNQ14247 550 aaKnown RBP15□□□□□ -0.01
MSH6-208ENST00000493177 KARSQ15046 597 aaKnown RBP15□□□□□ -0.01
MSH6-208ENST00000493177 RAB30Q15771 203 aa15□□□□□ -0.01
MSH6-208ENST00000493177 B3GNT9Q6UX72 402 aa15□□□□□ -0.01
MSH6-208ENST00000493177 TPH2Q8IWU9 490 aa15□□□□□ -0.01
MSH6-208ENST00000493177 PDILTQ8N807 584 aa15□□□□□ -0.01
MSH6-208ENST00000493177 BANK1Q8NDB2 785 aa15□□□□□ -0.01
MSH6-208ENST00000493177 CCSER1Q9C0I3 900 aa15□□□□□ -0.01
MSH6-208ENST00000493177 GOLPH3LQ9H4A5 285 aa15□□□□□ -0.01
MSH6-208ENST00000493177 AZI2Q9H6S1 392 aa15□□□□□ -0.01
MSH6-208ENST00000493177 RGL1Q9NZL6 768 aa15□□□□□ -0.01
MSH6-208ENST00000493177 CXXC1Q9P0U4 656 aaPredicted RBP15□□□□□ -0.01
MSH6-208ENST00000493177 GABBR1Q9UBS5 961 aa15□□□□□ -0.01
MSH6-208ENST00000493177 GSTTP1A0A1W2PQM5 241 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 POTEB3A0JP26 581 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 MED24O75448 989 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 P4HBP07237 508 aaKnown RBP14.99□□□□□ -0.01
MSH6-208ENST00000493177 SYKP43405 635 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 NDUFA8P51970 172 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 RRAGBQ5VZM2 374 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 FAM160B1Q5W0V3 765 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 SWSAP1Q6NVH7 229 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 POTEBQ6S5H4 581 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 ABHD15Q6UXT9 468 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 NEK9Q8TD19 979 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 MMTAG2Q9BU76 263 aaKnown RBP14.99□□□□□ -0.01
MSH6-208ENST00000493177 POLR3CQ9BUI4 534 aaPredicted RBP14.99□□□□□ -0.01
MSH6-208ENST00000493177 PBX4Q9BYU1 374 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 SEMA6BQ9H3T3 888 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 RNPEPQ9H4A4 650 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 ZNF302Q9NR11 478 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 SETD4Q9NVD3 440 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 ERAP1Q9NZ08 941 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 KCNH3Q9ULD8 1083 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 STXBP5LQ9Y2K9 1186 aa14.99□□□□□ -0.01
MSH6-208ENST00000493177 MYH9P35579 1960 aaKnown RBP14.98□□□□□ -0.01
MSH6-208ENST00000493177 POLR2DO15514 142 aaKnown RBP14.98□□□□□ -0.01
MSH6-208ENST00000493177 ATP2A2P16615 1042 aaKnown RBP14.98□□□□□ -0.01
MSH6-208ENST00000493177 LIG1P18858 919 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 RPA1P27694 616 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 STAT6P42226 847 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 RASIP1Q5U651 963 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 CATSPER3Q86XQ3 398 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 DHX38Q92620 1227 aaKnown RBP14.98□□□□□ -0.01
MSH6-208ENST00000493177 DHX58Q96C10 678 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 PYM1Q9BRP8 204 aaKnown RBP14.98□□□□□ -0.01
MSH6-208ENST00000493177 LXNQ9BS40 222 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 NT5C3AQ9H0P0 336 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 SMARCAD1Q9H4L7 1026 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 TUFT1Q9NNX1 390 aa14.98□□□□□ -0.01
MSH6-208ENST00000493177 KIAA1024Q9UPX6 916 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms