RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TUFT1Q9NNX1 390 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 STK24Q9Y6E0 443 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 ALPK3Q96L96 1907 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 VWA3AA6NCI4 1184 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 M0QZ92 97 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 FGBP02675 491 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 PFKMP08237 780 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 TMOD1P28289 359 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 CCT6AP40227 531 aaKnown RBP15.63■□□□□ 0.09
CCM2-217ENST00000492883 CEBPZQ03701 1054 aaKnown RBP15.63■□□□□ 0.09
CCM2-217ENST00000492883 SHHQ15465 462 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 TARBP2Q15633 366 aaKnown RBP15.63■□□□□ 0.09
CCM2-217ENST00000492883 IER5Q5VY09 327 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 HAUS3Q68CZ6 603 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 PLA2G4FQ68DD2 849 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 EFCAB12Q6NXP0 572 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 PSRC1Q6PGN9 363 aaPredicted RBP15.63■□□□□ 0.09
CCM2-217ENST00000492883 ZNF365Q70YC5 407 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 C16orf59Q7L2K0 433 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 CATSPER3Q86XQ3 398 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 TDHQ8IZJ6 230 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 POLR3CQ9BUI4 534 aaPredicted RBP15.63■□□□□ 0.09
CCM2-217ENST00000492883 CYP26B1Q9NR63 512 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 CLIC4Q9Y696 253 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 DOCK5Q9H7D0 1870 aa15.63■□□□□ 0.09
CCM2-217ENST00000492883 ZBTB39O15060 712 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 MED24O75448 989 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 LYPLA2O95372 231 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 SPATA31C1P0DKV0 1188 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 RPA1P27694 616 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 NPEPPSP55786 919 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 MRPS6P82932 125 aaKnown RBP15.62■□□□□ 0.09
CCM2-217ENST00000492883 TMEM62Q0P6H9 643 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 PKP1Q13835 747 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 XKR9Q5GH70 373 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 FAM26DQ5JW98 314 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 TMEM240Q5SV17 173 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 C9orf50Q5SZB4 431 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 KRT79Q5XKE5 535 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 TRAF7Q6Q0C0 670 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 KIAA0319LQ8IZA0 1049 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 IGSF22Q8N9C0 903 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 SNX29Q8TEQ0 813 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 CCDC43Q96MW1 224 aaKnown RBP15.62■□□□□ 0.09
CCM2-217ENST00000492883 ZNF396Q96N95 335 aaPredicted RBP15.62■□□□□ 0.09
CCM2-217ENST00000492883 MAP7D2Q96T17 732 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCM2-217ENST00000492883 CDY2AQ9Y6F7 541 aa15.62■□□□□ 0.09
CCM2-217ENST00000492883 A0A087WWV3 80 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 A0A1W2PPC1 479 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 NBNO60934 754 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 F13A1P00488 732 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 CHRNA1P02708 482 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 ACTN1P12814 892 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 XRCC6P12956 609 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCM2-217ENST00000492883 DNM2P50570 870 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 CLCN3P51790 818 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 FOXD4L6Q3SYB3 417 aaPredicted RBP15.61■□□□□ 0.09
CCM2-217ENST00000492883 FOXD4L3Q6VB84 417 aaPredicted RBP15.61■□□□□ 0.09
CCM2-217ENST00000492883 OTOP2Q7RTS6 562 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 EXOC8Q8IYI6 725 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 LRRC71Q8N4P6 559 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
CCM2-217ENST00000492883 PIGOQ8TEQ8 1089 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 SLC7A3Q8WY07 619 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 RNPC3Q96LT9 517 aaKnown RBP15.61■□□□□ 0.09
CCM2-217ENST00000492883 NACC1Q96RE7 527 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 JPH2Q9BR39 696 aaPredicted RBP15.61■□□□□ 0.09
CCM2-217ENST00000492883 ANKEF1Q9NU02 776 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 DAXXQ9UER7 740 aaPredicted RBP15.61■□□□□ 0.09
CCM2-217ENST00000492883 AKT3Q9Y243 479 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 GINS2Q9Y248 185 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 PPME1Q9Y570 386 aa15.61■□□□□ 0.09
CCM2-217ENST00000492883 PP2D1A8MPX8 630 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 MAFO75444 373 aaPredicted RBP15.6■□□□□ 0.09
CCM2-217ENST00000492883 VTNP04004 478 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 MUTP22033 750 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 MARCKSP29966 332 aaPredicted RBP15.6■□□□□ 0.09
CCM2-217ENST00000492883 CDC25AP30304 524 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 POLGP54098 1239 aaPredicted RBP15.6■□□□□ 0.09
CCM2-217ENST00000492883 MBTPS1Q14703 1052 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 GPNMBQ14956 572 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 ZRSR1Q15695 479 aaKnown RBP15.6■□□□□ 0.09
CCM2-217ENST00000492883 USP28Q96RU2 1077 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 CEP89Q96ST8 783 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 CELF4Q9BZC1 486 aaKnown RBP15.6■□□□□ 0.09
CCM2-217ENST00000492883 MTIF3Q9H2K0 278 aaKnown RBP15.6■□□□□ 0.09
CCM2-217ENST00000492883 TFIP11Q9UBB9 837 aaKnown RBP15.6■□□□□ 0.09
CCM2-217ENST00000492883 TRPV2Q9Y5S1 764 aa15.6■□□□□ 0.09
CCM2-217ENST00000492883 ZBBXA8MT70 800 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 CXCL10P02778 98 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 RFC5P40937 340 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 MGAT3Q09327 533 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 STK38Q15208 465 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 PTPAQ15257 358 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 POTEGQ6S5H5 508 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 HERVK_113Q902F9 699 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 VWCEQ96DN2 955 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 AK8Q96MA6 479 aa15.59■□□□□ 0.09
CCM2-217ENST00000492883 PPP1R16BQ96T49 567 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms